RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 Q6ZS46 218 aa17.22■□□□□ 0.35
PPP4R1-228ENST00000584074 FAM110DQ8TAY7 271 aaPredicted RBP17.22■□□□□ 0.35
PPP4R1-228ENST00000584074 NCOR1P1Q9H4R4 102 aa17.22■□□□□ 0.35
PPP4R1-228ENST00000584074 FKBP14Q9NWM8 211 aa17.22■□□□□ 0.35
PPP4R1-228ENST00000584074 PAK1IP1Q9NWT1 392 aaPredicted RBP17.22■□□□□ 0.35
PPP4R1-228ENST00000584074 BUB1B-PAK6H3BSN5 160 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 FSTP19883 344 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 KCNJ3P48549 501 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 PRRX1P54821 245 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 PAX5Q02548 391 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 RBM39Q14498 530 aaKnown RBP17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 HLA-DRB5Q30154 266 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 NANOGP1Q8N7R0 232 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 RFESDQ8TAC1 157 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 MRGPRDQ8TDS7 321 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 CFHR4Q92496 578 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 PRSS22Q9GZN4 317 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 IFT22Q9H7X7 185 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 LINC00574Q9H8X3 128 aa17.21■□□□□ 0.35
PPP4R1-228ENST00000584074 LY6LH3BQJ8 138 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 IL1AP01583 271 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 IGHV3-7P01780 117 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 CSF1P09603 554 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 DEFA6Q01524 100 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 LTC4SQ16873 150 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 FBLN7Q53RD9 439 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 TPTE2P1Q5T6R2 138 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 JAGN1Q8N5M9 183 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 LEAP2Q969E1 77 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 MUL1Q969V5 352 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 DERL3Q96Q80 235 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 IDI2-AS1Q9NZ38 188 aa17.2■□□□□ 0.34
PPP4R1-228ENST00000584074 PIN1P1O15428 100 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 ZNF780AO75290 641 aaPredicted RBP17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 MAS1P04201 325 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 GTF2F2P13984 249 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 BRS3P32247 399 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 SSTR5P35346 364 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 CEACAM3P40198 252 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 OR9G1Q8NH87 305 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 NRG4Q8WWG1 115 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 CREB3L1Q96BA8 519 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 OR5M11Q96RB7 305 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 ERGIC3Q9Y282 383 aa17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 MRPS28Q9Y2Q9 187 aaKnown RBP17.19■□□□□ 0.34
PPP4R1-228ENST00000584074 KIAA2026Q5HYC2 2103 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 NPIPB11E5RHQ5 1161 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 PTGES3LE9PB15 166 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 CD1AP06126 327 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 MPV17LQ2QL34 196 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 ATAD3CQ5T2N8 411 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 GLIPR1L1Q6UWM5 242 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 LINC00596Q86U02 117 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 MMP28Q9H239 520 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 PCDHB16Q9NRJ7 776 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 PSG11Q9UQ72 335 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 WNK1Q9H4A3 2382 aa17.18■□□□□ 0.34
PPP4R1-228ENST00000584074 H3BUI4 141 aa17.17■□□□□ 0.34
PPP4R1-228ENST00000584074 J3QR06 171 aa17.17■□□□□ 0.34
PPP4R1-228ENST00000584074 CDK1P06493 297 aa17.17■□□□□ 0.34
PPP4R1-228ENST00000584074 ARHGDIBP52566 201 aa17.17■□□□□ 0.34
PPP4R1-228ENST00000584074 TMEM95Q3KNT9 176 aa17.17■□□□□ 0.34
PPP4R1-228ENST00000584074 ARSJQ5FYB0 599 aaPredicted RBP17.17■□□□□ 0.34
PPP4R1-228ENST00000584074 C6orf141Q5SZD1 244 aa17.17■□□□□ 0.34
PPP4R1-228ENST00000584074 SGCDQ92629 289 aa17.17■□□□□ 0.34
PPP4R1-228ENST00000584074 NOTCH1P46531 2555 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 TMEM30CPA0ZSE6 113 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 CD28P10747 220 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 GNG10P50151 68 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 AQP4P55087 323 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 GPR176Q14439 515 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 INSL4Q14641 139 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 LYPD6Q86Y78 171 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 CDH26Q8IXH8 852 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 LYG1Q8N1E2 194 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 NEK7Q8TDX7 302 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 WNT10AQ9GZT5 417 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 LIN7BQ9HAP6 207 aa17.16■□□□□ 0.34
PPP4R1-228ENST00000584074 OOSP1A8MZH6 123 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 PEX14O75381 377 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 VDAC2P45880 294 aaPredicted RBP17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 RNLSQ5VYX0 342 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 AWAT2Q6E213 333 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 CCDC144NLQ6NUI1 221 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 C16orf82Q7Z2V1 217 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 OR10A7Q8NGE5 316 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 WIPF2Q8TF74 440 aaPredicted RBP17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 CCDC107Q8WV48 283 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 SLC25A33Q9BSK2 321 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 MND1Q9BWT6 205 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 BANF2Q9H503 90 aa17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 AMMECR1Q9Y4X0 333 aaPredicted RBP17.15■□□□□ 0.34
PPP4R1-228ENST00000584074 TET2Q6N021 2002 aaPredicted RBP17.14■□□□□ 0.34
PPP4R1-228ENST00000584074 A0A1W2PPE3 182 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 FBXO24O75426 580 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 MT-ND4P03905 459 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 GZMHP20718 246 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 MNDAP41218 407 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 ZNF497Q6ZNH5 498 aa17.14■□□□□ 0.33
PPP4R1-228ENST00000584074 TMEM104Q8NE00 496 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms