RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 EIF4E3Q8N5X7 224 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-209ENST00000583441 ANGPTL6Q8NI99 470 aa1.84□□□□□ -2.11
SMCHD1-209ENST00000583441 FXYD5Q96DB9 178 aa1.84□□□□□ -2.11
SMCHD1-209ENST00000583441 TRIB3Q96RU7 358 aa1.84□□□□□ -2.11
SMCHD1-209ENST00000583441 EBPLQ9BY08 206 aa1.84□□□□□ -2.11
SMCHD1-209ENST00000583441 BCL2L14Q9BZR8 327 aa1.84□□□□□ -2.11
SMCHD1-209ENST00000583441 ZNF586Q9NXT0 402 aa1.84□□□□□ -2.11
SMCHD1-209ENST00000583441 CD300AQ9UGN4 299 aa1.84□□□□□ -2.11
SMCHD1-209ENST00000583441 KIAA0232Q92628 1395 aa1.84□□□□□ -2.12
SMCHD1-209ENST00000583441 ATRNO75882 1429 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 SCN4AP35499 1836 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 A0A0B4J2C4 111 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 OR5H14A6NHG9 310 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 A8MWP4 228 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 F8VZ95 297 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 H3BMM0 161 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 LIN7AO14910 233 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 IGKV1D-33P01593 117 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 IGKV1-33P01594 117 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 IGHMP01871 453 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 ZNF708P17019 499 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 TGFBR2P37173 567 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 MAGEA6P43360 314 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 INPP1P49441 399 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 XRCC4Q13426 336 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 SLC9A3R2Q15599 337 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 PYCR3Q53H96 274 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 PYDC2Q56P42 97 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 LAIR2Q6ISS4 152 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 TCF24Q7RTU0 167 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 MARCH3Q86UD3 253 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 LY6G5BQ8NDX9 201 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 UBE2WQ96B02 151 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 REEP6Q96HR9 211 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 PRSS27Q9BQR3 290 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 HIGD2AQ9BW72 106 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 UGT2B28Q9BY64 529 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 TAS2R13Q9NYV9 303 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 TBL2Q9Y4P3 447 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 GMEB1Q9Y692 573 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 TICRRQ7Z2Z1 1910 aa1.83□□□□□ -2.12
SMCHD1-209ENST00000583441 SVILO95425 2214 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 IGHV3OR15-7A0A075B7D8 119 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 IQCF5A8MTL0 148 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 GGTLC3B5MD39 225 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 FGF16O43320 207 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 GP1BAP07359 652 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 LIMS3P0CW19 117 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 LIMS4P0CW20 117 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 PSKH1P11801 424 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 GABRA1P14867 456 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 KDELR2P33947 212 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 RCVRNP35243 200 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 MP68P56378 58 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 OR10A3P58181 314 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 RAB8AP61006 207 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 DHRS2Q13268 280 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 EXOC3L4Q17RC7 722 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 KRTAP25-1Q3LHN0 102 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 ELP2Q6IA86 826 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 BRD3OSQ6XYD6 125 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 CLEC20AQ6ZU45 233 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 MTERF4Q7Z6M4 381 aaKnown RBP1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 SPATA24Q86W54 205 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 OR5AK3PQ8NH89 298 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 CCDC12Q8WUD4 166 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 IGF2BP2-AS1Q96M15 143 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 OR2D2Q9H210 308 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 DMAC2Q9NW81 257 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 CFAP45Q9UL16 551 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 ZNF443Q9Y2A4 671 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 ADAMTSL3P82987 1691 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 SEC16AO15027 2179 aa1.82□□□□□ -2.12
SMCHD1-209ENST00000583441 SHROOM3Q8TF72 1996 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 TRBV24-1A0A075B6N3 115 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 TMEM213A2RRL7 107 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 ERICH4A6NGS2 130 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 ARGFXA6NJG6 315 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 EFCAB9A8MZ26 197 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 MKRN2OSH3BPM6 223 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 POLR3GO15318 223 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 AQP9O43315 295 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 SYNGR1O43759 233 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 SH2D1AO60880 128 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 SOX14O95416 240 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 OPN1SWP03999 348 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 GYPCP04921 128 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 CGB3P0DN86 165 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 CGB7P0DN87 165 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 ZNF3P17036 446 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 ACTR1BP42025 376 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 GTF2BQ00403 316 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 HCP5Q6MZN7 132 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 CRLF3Q8IUI8 442 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 MUC15Q8N387 334 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 KRTCAP2Q8N6L1 136 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 ATP6V1C2Q8NEY4 427 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 OR4P4Q8NGL7 312 aa1.81□□□□□ -2.12
SMCHD1-209ENST00000583441 SPPL2BQ8TCT7 592 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms