RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 FAM90A5PA8MXJ8 464 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 VSTM5A8MXK1 200 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 FAM90A23PA8MXZ1 464 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 IQCF6A8MYZ5 107 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 SOCS1O15524 211 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 TCF21O43680 179 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 CA11O75493 328 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 RAB3DO95716 219 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 TCRBP04435 133 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 IFNA6P05013 189 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 FAM90A15PP0C7V4 464 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 FAM90A13PP0C7W8 464 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 FAM90A14PP0C7W9 464 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 FAM90A24PP0C7X0 464 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 GNB3P16520 340 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 RAG2P55895 527 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 NAAAQ02083 359 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 MOGAT2Q3SYC2 334 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 PLA1AQ53H76 456 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 RNASE10Q5GAN6 216 aaKnown RBP8.6□□□□□ -1.03
SS18-221ENST00000582448 SFRP4Q6FHJ7 346 aaPredicted RBP8.6□□□□□ -1.03
SS18-221ENST00000582448 RGS7BPQ6MZT1 257 aaPredicted RBP8.6□□□□□ -1.03
SS18-221ENST00000582448 CRIP3Q6Q6R5 217 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 BTN2A1Q7KYR7 527 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 RNF144BQ7Z419 303 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 C1QL2Q7Z5L3 287 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 MYPOPQ86VE0 399 aaPredicted RBP8.6□□□□□ -1.03
SS18-221ENST00000582448 CADM3Q8N126 398 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 OR8G5Q8NG78 346 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 OR56B4Q8NH76 319 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 VRK1Q99986 396 aaPredicted RBP8.6□□□□□ -1.03
SS18-221ENST00000582448 NICN1Q9BSH3 213 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 PIMREGQ9BSJ6 248 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 PKIBQ9C010 78 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 POFUT1Q9H488 388 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.6□□□□□ -1.03
SS18-221ENST00000582448 TMEM100Q9NV29 134 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 NUDT15Q9NV35 164 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 SCP2D1Q9UJQ7 156 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 ST3GAL6Q9Y274 331 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 POLDIP2Q9Y2S7 368 aa8.6□□□□□ -1.03
SS18-221ENST00000582448 YLPM1P49750 1951 aaKnown RBP8.59□□□□□ -1.03
SS18-221ENST00000582448 IGHV4-61A0A0C4DH41 118 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 PLSCR5A0PG75 271 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 LRP5LA4QPB2 252 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 TMEM210A6NLX4 147 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 J3QT63 122 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 PRAF2O60831 178 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 KITLGP21583 273 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 APOBEC3AP31941 199 aaPredicted RBP8.59□□□□□ -1.03
SS18-221ENST00000582448 CCR6P51684 374 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 IL24Q13007 206 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 ZMYND11Q15326 602 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 RBMS2Q15434 407 aaKnown RBP8.59□□□□□ -1.03
SS18-221ENST00000582448 TATDN3Q17R31 274 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 MBNL2Q5VZF2 373 aaKnown RBP8.59□□□□□ -1.03
SS18-221ENST00000582448 HAGHLQ6PII5 290 aaPredicted RBP8.59□□□□□ -1.03
SS18-221ENST00000582448 FIP1L1Q6UN15 594 aaKnown RBP8.59□□□□□ -1.03
SS18-221ENST00000582448 TMEM17Q86X19 198 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 Q8IYB0 196 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 SLAMF9Q96A28 289 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 MARS2Q96GW9 593 aaKnown RBP8.59□□□□□ -1.03
SS18-221ENST00000582448 ARHGAP5-AS1Q96IT6 56 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 PRRT1Q99946 306 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 PECRQ9BY49 303 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 SPACA1Q9HBV2 294 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 PURGQ9UJV8 347 aaKnown RBP8.59□□□□□ -1.03
SS18-221ENST00000582448 HSF4Q9ULV5 492 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 ANK2Q01484 3957 aa8.59□□□□□ -1.03
SS18-221ENST00000582448 TRAV6A0A075B6T7 132 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 A0A1W2PP11 408 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 MFNGO00587 321 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 CD3DP04234 171 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 TRAPPC2P0DI81 140 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 TRAPPC2BP0DI82 140 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 HLA-DMAP28067 261 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 GLRXP35754 106 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 OR3A3P47888 321 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 RBM11P57052 281 aaKnown RBP8.58□□□□□ -1.04
SS18-221ENST00000582448 KLF3P57682 345 aaPredicted RBP8.58□□□□□ -1.04
SS18-221ENST00000582448 RAB25P57735 213 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 TAS2R46P59540 309 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 ERVS71-1P61550 626 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 PSG7Q13046 419 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 TAF9Q16594 264 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 ELP2Q6IA86 826 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 LINC00596Q86U02 117 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 CALHM1Q8IU99 346 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
SS18-221ENST00000582448 OR4C16Q8NGL9 310 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 OR13G1Q8NGZ3 307 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 NUDCD2Q8WVJ2 157 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 HPSE2Q8WWQ2 592 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 UPRTQ96BW1 309 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 SLC25A21Q9BQT8 299 aaPredicted RBP8.58□□□□□ -1.04
SS18-221ENST00000582448 GINS4Q9BRT9 223 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 C20orf85Q9H1P6 137 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 MSL2Q9HCI7 577 aa8.58□□□□□ -1.04
SS18-221ENST00000582448 GPN1Q9HCN4 374 aaPredicted RBP8.58□□□□□ -1.04
SS18-221ENST00000582448 MALRD1Q5VYJ5 2156 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms