RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	RSBN1	Q5VWQ0	802 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708		Q6ZTK2	550 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	OR9G1	Q8NH87	305 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CFHR4	Q92496	578 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	KIRREL1	Q96J84	757 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	UQCC2	Q9BRT2	126 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	DPCD	Q9BVM2	203 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MND1	Q9BWT6	205 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PRSS22	Q9GZN4	317 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	VCX3B	Q9H321	246 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CALY	Q9NYX4	217 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GHRL	Q9UBU3	117 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	KIF25	Q9UIL4	384 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ING4	Q9UNL4	249 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	HILPDA	Q9Y5L2	63 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	BUB1B-PAK6	H3BSN5	160 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	OR7C1	O76099	320 aa	Predicted RBP	10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GLA	P06280	429 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CDK1	P06493	297 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MNDA	P41218	407 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GABPB1	Q06547	395 aa	Predicted RBP	10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PIGY	Q3MUY2	71 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	SUMF2	Q8NBJ7	301 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	OR52M1	Q8NGK5	317 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	OR13C5	Q8NGS8	318 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	OR10K1	Q8NGX5	313 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	DERL3	Q96Q80	235 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	OR14A2	Q96R54	314 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PPIL3	Q9H2H8	161 aa	Known RBP	10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	LIN7B	Q9HAP6	207 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	RAB9B	Q9NP90	201 aa		10.13	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TRAV8-7	A0A075B6U6	113 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TMEM30CP	A0ZSE6	113 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	LY6L	H3BQJ8	138 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708		M0QZK8	103 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CA11	O75493	328 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PAX6	P26367	422 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GLP1R	P43220	463 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	RAB13	P51153	203 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	RBM39	Q14498	530 aa	Known RBP	10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	SPHAR	Q15513	63 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TMEM30B	Q3MIR4	351 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708		Q3ZCU0	254 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	LYPD6	Q86Y78	171 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	THNSL2	Q86YJ6	484 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ZFP41	Q8N8Y5	198 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	C8orf31	Q8N9H6	132 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	OR13A1	Q8NGR1	328 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PHYHIP	Q92561	330 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MMP28	Q9H239	520 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ZNF702P	Q9H963	129 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ZNF286A	Q9HBT8	521 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	IDI2-AS1	Q9NZ38	188 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	RCC2	Q9P258	522 aa	Known RBP	10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	NKX1-2	Q9UD57	310 aa	Predicted RBP	10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TPRKB	Q9Y3C4	175 aa		10.12	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ANKRD65	E5RJM6	399 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708		H0YHG0	523 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708		J3QR06	171 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	HSPB6	O14558	160 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GEMIN2	O14893	280 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ORC5	O43913	435 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	UBB	P0CG47	229 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	SERPINA2	P20848	420 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GDNF	P39905	211 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	HSPA13	P48723	471 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	SLC22A6	Q4U2R8	563 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PLA1A	Q53H76	456 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TPTE2P1	Q5T6R2	138 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	UNQ9370/PRO34162	Q6UXP9	181 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	JAGN1	Q8N5M9	183 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	KLHDC1	Q8N7A1	406 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PLPPR1	Q8TBJ4	325 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CAPSL	Q8WWF8	208 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	NKX3-1	Q99801	234 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ANKRD60	Q9BZ19	345 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ISYNA1	Q9NPH2	558 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	SERTAD4	Q9NUC0	356 aa		10.11	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MCRIP1	C9JLW8	97 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PTGES3L	E9PB15	166 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CSF1	P09603	554 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM106CP	P0CH98	169 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MYF6	P23409	242 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	NFYB	P25208	207 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	RANBP1	P43487	201 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	RAB7A	P51149	207 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	SLC35A2	P78381	396 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MADCAM1	Q13477	382 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TRAM1	Q15629	374 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	AWAT2	Q6E213	333 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TRAT1	Q6PIZ9	186 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GLIPR1L1	Q6UWM5	242 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ZNF497	Q6ZNH5	498 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ZNF554	Q86TJ5	538 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TMEM219	Q86XT9	240 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	OR8H3	Q8N146	312 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GAPT	Q8N292	157 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MRGPRD	Q8TDS7	321 aa		10.1	□□□□□ -0.79

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