RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 PLEKHJ1Q9NW61 149 aa12.41□□□□□ -0.42
MKS1-210ENST00000581180 ING3Q9NXR8 418 aa12.41□□□□□ -0.42
MKS1-210ENST00000581180 ETAA1Q9NY74 926 aa12.41□□□□□ -0.42
MKS1-210ENST00000581180 RSL24D1Q9UHA3 163 aaKnown RBP12.41□□□□□ -0.42
MKS1-210ENST00000581180 LINC00312Q9Y6C7 94 aa12.41□□□□□ -0.42
MKS1-210ENST00000581180 TMEM30CPA0ZSE6 113 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 MEX3AA1L020 520 aaKnown RBP12.4□□□□□ -0.42
MKS1-210ENST00000581180 DPPA5A6NC42 116 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 C17orf98A8MV24 154 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 M0R1W7 72 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 CA11O75493 328 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 MT-ND4P03905 459 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 FAM120AOSQ5T036 256 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 NEK7Q8TDX7 302 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 ACOT12Q8WYK0 555 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 UPRTQ96BW1 309 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 WDFY2Q96P53 400 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 ABCG5Q9H222 651 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 ONECUT1Q9UBC0 465 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 KCNK7Q9Y2U2 307 aa12.4□□□□□ -0.42
MKS1-210ENST00000581180 UBE2J1Q9Y385 318 aaPredicted RBP12.4□□□□□ -0.42
MKS1-210ENST00000581180 MEIKINA0A087WXM9 373 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 TRGV10A0A0A0MS01 117 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 CCDC160A6NGH7 325 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 INAFM1C9JVW0 142 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 MFNGO00587 321 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 FSHBP01225 129 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 ZNF728P0DKX0 622 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 METTL11BQ5VVY1 283 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 FOXB2Q5VYV0 432 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 CMTM4Q8IZR5 234 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 OR13A1Q8NGR1 328 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 RAB3CQ96E17 227 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 ZNF714Q96N38 554 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 UNKLQ9H9P5 680 aaKnown RBP12.39□□□□□ -0.43
MKS1-210ENST00000581180 TAS2R3Q9NYW6 316 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 OR6C3Q9NZP0 311 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 CCDC59Q9P031 241 aaKnown RBP12.39□□□□□ -0.43
MKS1-210ENST00000581180 NDUFA13Q9P0J0 144 aa12.39□□□□□ -0.43
MKS1-210ENST00000581180 TRAV39A0A0B4J263 110 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 A0A1W2PPH5 198 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 SCGNO76038 276 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 TOX4O94842 621 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 NAPSAO96009 420 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 RBP4P02753 201 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 PRTN3P24158 256 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 ERVFRD-1P60508 538 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 C17orf58Q2M2W7 97 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 KLF17Q5JT82 389 aaPredicted RBP12.38□□□□□ -0.43
MKS1-210ENST00000581180 UBE2NLQ5JXB2 153 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 OLFML2AQ68BL7 652 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 Q6ZPA2 131 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 VMO1Q7Z5L0 202 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 SAMD12Q8N8I0 201 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 MRPL30Q8TCC3 161 aaKnown RBP12.38□□□□□ -0.43
MKS1-210ENST00000581180 AP3S1Q92572 193 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 TNFRSF14Q92956 283 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 CMTM3Q96MX0 182 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 PCGF1Q9BSM1 259 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.38□□□□□ -0.43
MKS1-210ENST00000581180 COMMD3Q9UBI1 195 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 AK3Q9UIJ7 227 aa12.38□□□□□ -0.43
MKS1-210ENST00000581180 TRBV6-6A0A0A6YYG2 114 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 A0A0A6YYH2 397 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 A6NJ64 397 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 ZNF729A6NN14 1252 aaPredicted RBP12.37□□□□□ -0.43
MKS1-210ENST00000581180 HIST1H1DP16402 221 aaKnown RBP12.37□□□□□ -0.43
MKS1-210ENST00000581180 GNB3P16520 340 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 SOX6P35712 828 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 GLP1RP43220 463 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 DLX1P56177 255 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 ZNF880Q6PDB4 577 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 IL17RELQ6ZVW7 336 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 TRAPPC6BQ86SZ2 158 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 ZNF565Q8N9K5 539 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 OR4K15Q8NH41 348 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 MRGPRDQ8TDS7 321 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 CCDC107Q8WV48 283 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 DGCR14Q96DF8 476 aaKnown RBP12.37□□□□□ -0.43
MKS1-210ENST00000581180 SLIRPQ9GZT3 109 aaKnown RBP12.37□□□□□ -0.43
MKS1-210ENST00000581180 METTL8Q9H825 291 aaKnown RBP12.37□□□□□ -0.43
MKS1-210ENST00000581180 LINC00574Q9H8X3 128 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 SIRT7Q9NRC8 400 aa12.37□□□□□ -0.43
MKS1-210ENST00000581180 MBNL3Q9NUK0 354 aaKnown RBP12.37□□□□□ -0.43
MKS1-210ENST00000581180 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 A6NHS1 94 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 SERPINE3A8MV23 424 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 NPIPB11E5RHQ5 1161 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 C15orf65H3BRN8 121 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 MMP23AO75900 390 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 APOA1P02647 267 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 EIF4EP06730 217 aaKnown RBP12.36□□□□□ -0.43
MKS1-210ENST00000581180 ZNF260Q3ZCT1 412 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 HCP5Q6MZN7 132 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 MZT2AQ6P582 158 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 HEPN1Q6WQI6 88 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 LURAP1LQ8IV03 231 aa12.36□□□□□ -0.43
MKS1-210ENST00000581180 HDHD3Q9BSH5 251 aaPredicted RBP12.36□□□□□ -0.43
MKS1-210ENST00000581180 NXF2Q9GZY0 626 aaKnown RBP12.36□□□□□ -0.43
MKS1-210ENST00000581180 GAL3ST2Q9H3Q3 398 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms