RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 A0A1W2PPI3 338 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 A8MZ25 164 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 UBCP0CG48 685 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 PRKACAP17612 351 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ATF1P18846 271 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 PRKACBP22694 351 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 PSMB8P28062 276 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 CD34P28906 385 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ERP29P30040 261 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 NPBWR2P48146 333 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 MTCP1P56278 107 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ISL1P61371 349 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 KDM4DQ6B0I6 523 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 LYPD6Q86Y78 171 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 RDH10Q8IZV5 341 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 PRSS35Q8N3Z0 413 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 DNAAF1Q8NEP3 725 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 LEAP2Q969E1 77 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 SLC7A6OSQ96CW6 309 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 KCTD7Q96MP8 289 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OR4C12Q96R67 309 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ALX4Q9H161 411 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 GNG8Q9UK08 70 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 VSIG4Q9Y279 399 aa10.18□□□□□ -0.78
CDK5RAP3-213ENST00000579605 LOC107986453A0A1B0GWG9 222 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 FUOMA2VDF0 154 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 SIRPB1O00241 398 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 SH2D1BO14796 132 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ENTPD6O75354 484 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OCM2P0CE71 109 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OCMP0CE72 109 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ZNF20P17024 532 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 FASP25445 335 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OR3A1P47881 315 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 GLIPR1P48060 266 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 CDC42P60953 191 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 CFHR3Q02985 330 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 AESQ08117 197 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ZNF146Q15072 292 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 TP53I3Q53FA7 332 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 SPIN3Q5JUX0 258 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 TMEM244Q5VVB8 128 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 MOB3BQ86TA1 216 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 TGIF2LXQ8IUE1 241 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 FAM71E2Q8N5Q1 922 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ZNF491Q8N8L2 437 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OR9G1Q8NH87 305 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ADAT3Q96EY9 351 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 UBE2E2Q96LR5 201 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 CIB1Q99828 191 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 HSPB9Q9BQS6 159 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ST6GALNAC5Q9BVH7 336 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 GABARAPL1Q9H0R8 117 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 EXOSC4Q9NPD3 245 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 GSTK1Q9Y2Q3 226 aa10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 AMMECR1Q9Y4X0 333 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-213ENST00000579605 IGKV1-9A0A0C4DH69 117 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 C12orf77C9JDV5 145 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 DEDDO75618 318 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 PTGFRP43088 359 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 KIR3DL2P43630 455 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ZNF85Q03923 595 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 TMED1Q13445 227 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 KIAA0141Q14154 515 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 RNLSQ5VYX0 342 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ACSM6Q6P461 480 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 AMIGO2Q86SJ2 522 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 Q8N9W7 124 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OR8J1Q8NGP2 316 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 RFKQ969G6 155 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 FGGYQ96C11 551 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 EAF1Q96JC9 268 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 RASL11BQ9BPW5 248 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 RIBC2Q9H4K1 309 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 HMG20AQ9NP66 347 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 LIN7CQ9NUP9 197 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 TAS2R3Q9NYW6 316 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 WSB1Q9Y6I7 421 aa10.16□□□□□ -0.78
CDK5RAP3-213ENST00000579605 J3QR06 171 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 BRI3O95415 125 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OR2H2O95918 312 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OR8U9P0C7N5 309 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 FCGR1AP12314 374 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 POLR2IP36954 125 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 RAB7AP51149 207 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 ZP1P60852 638 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 PITPNAQ00169 270 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 RUNX1Q01196 453 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 PDZK1IP1Q13113 114 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 MADCAM1Q13477 382 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 PMS2P11Q13670 270 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 LTC4SQ16873 150 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 UTS2BQ765I0 119 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OR2G2Q8NGZ5 317 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 CORO2AQ92828 525 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 RFT1Q96AA3 541 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 SPSB1Q96BD6 273 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 OPALINQ96PE5 141 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 RSRP1Q9BUV0 290 aa10.15□□□□□ -0.78
CDK5RAP3-213ENST00000579605 AP4S1Q9Y587 144 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms