RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 OR6C3Q9NZP0 311 aa7.07□□□□□ -1.28
GGA3-207ENST00000578896 ING4Q9UNL4 249 aa7.07□□□□□ -1.28
GGA3-207ENST00000578896 DHDHQ9UQ10 334 aa7.07□□□□□ -1.28
GGA3-207ENST00000578896 MOB4Q9Y3A3 225 aa7.07□□□□□ -1.28
GGA3-207ENST00000578896 ORC6Q9Y5N6 252 aa7.07□□□□□ -1.28
GGA3-207ENST00000578896 GMPPBQ9Y5P6 360 aa7.07□□□□□ -1.28
GGA3-207ENST00000578896 HSPE1-MOB4S4R3N1 261 aa7.07□□□□□ -1.28
GGA3-207ENST00000578896 IGHV3-43A0A0B4J1X8 118 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 SERPINE3A8MV23 424 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 ATP5HO75947 161 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 IL1AP01583 271 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 IGKV1D-33P01593 117 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 IGKV1-33P01594 117 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 RPSAP08865 295 aaKnown RBP7.06□□□□□ -1.28
GGA3-207ENST00000578896 FAM106CPP0CH98 169 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 IGHV3-43DP0DP04 118 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 VSIG8P0DPA2 414 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 C21orf33P30042 268 aaPredicted RBP7.06□□□□□ -1.28
GGA3-207ENST00000578896 MTNR1BP49286 362 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 ALDH3A2P51648 485 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 RPL23AP62750 156 aaKnown RBP7.06□□□□□ -1.28
GGA3-207ENST00000578896 VAX1Q5SQQ9 334 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 MEDAGQ5VYS4 303 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 CCDC144NLQ6NUI1 221 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 OR2W3Q7Z3T1 314 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 MOB3BQ86TA1 216 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 PARP16Q8N5Y8 322 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 C5orf56Q8N8D9 126 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 ZNF565Q8N9K5 539 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 SUMF2Q8NBJ7 301 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 OR52I1Q8NGK6 324 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 OR13C5Q8NGS8 318 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 CCDC107Q8WV48 283 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 CREB3L1Q96BA8 519 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 RCC1LQ96I51 464 aaKnown RBP7.06□□□□□ -1.28
GGA3-207ENST00000578896 BARHL1Q9BZE3 327 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 ERVK13-1Q9NX77 482 aa7.06□□□□□ -1.28
GGA3-207ENST00000578896 SIRT4Q9Y6E7 314 aaPredicted RBP7.06□□□□□ -1.28
GGA3-207ENST00000578896 A0A1W2PP11 408 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 TMEM212A6NML5 194 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 NUDT19A8MXV4 375 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 OOSP1A8MZH6 123 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 NPIPB11E5RHQ5 1161 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 CLIC3O95833 236 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 RAB3AP20336 220 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 THBS3P49746 956 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 GBX2P52951 348 aaPredicted RBP7.05□□□□□ -1.28
GGA3-207ENST00000578896 RAB25P57735 213 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 MADCAM1Q13477 382 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 RSU1Q15404 277 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 SMN1Q16637 294 aaKnown RBP7.05□□□□□ -1.28
GGA3-207ENST00000578896 ELP2Q6IA86 826 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 C5orf24Q7Z6I8 188 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 THNSL2Q86YJ6 484 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 SYS1Q8N2H4 156 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 KLHL30-AS1Q8NEE0 82 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 PXT1Q8NFP0 134 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 OR10X1Q8NGY0 326 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 RHOXF1Q8NHV9 184 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 APH1BQ8WW43 257 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 DPCDQ9BVM2 203 aaPredicted RBP7.05□□□□□ -1.28
GGA3-207ENST00000578896 JAM3Q9BX67 310 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 RHOFQ9HBH0 211 aa7.05□□□□□ -1.28
GGA3-207ENST00000578896 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.05□□□□□ -1.28
GGA3-207ENST00000578896 AMMECR1Q9Y4X0 333 aaPredicted RBP7.05□□□□□ -1.28
GGA3-207ENST00000578896 STAB2Q8WWQ8 2551 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 SNTNA6NMZ2 147 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 NCBP2LA6PVI3 153 aaKnown RBP7.04□□□□□ -1.28
GGA3-207ENST00000578896 ZNF736B4DX44 427 aaPredicted RBP7.04□□□□□ -1.28
GGA3-207ENST00000578896 M0QZK8 103 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 CCRL2O00421 344 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 HSD17B6O14756 317 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 GEMIN2O14893 280 aaKnown RBP7.04□□□□□ -1.28
GGA3-207ENST00000578896 SLC31A2O15432 143 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 MAGEB3O15480 346 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 OR7C1O76099 320 aaPredicted RBP7.04□□□□□ -1.28
GGA3-207ENST00000578896 FADS2O95864 444 aaKnown RBP7.04□□□□□ -1.28
GGA3-207ENST00000578896 LIMS3P0CW19 117 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 LIMS4P0CW20 117 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 SERPINA2P20848 420 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 ETV1P50549 477 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 IL13RA2Q14627 380 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 DEFB136Q30KP8 78 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 ATAD3CQ5T2N8 411 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 OR2G6Q5TZ20 316 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 ZNF529Q6P280 563 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 SLC35E3Q7Z769 313 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 TFAP2CQ92754 450 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 ARL11Q969Q4 196 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 MRPL48Q96GC5 212 aaKnown RBP7.04□□□□□ -1.28
GGA3-207ENST00000578896 EAF1Q96JC9 268 aaPredicted RBP7.04□□□□□ -1.28
GGA3-207ENST00000578896 ST3GAL6Q9Y274 331 aa7.04□□□□□ -1.28
GGA3-207ENST00000578896 IGHV1-3A0A0C4DH29 117 aa7.03□□□□□ -1.28
GGA3-207ENST00000578896 LOC100130705A0A1B0GUX0 176 aa7.03□□□□□ -1.28
GGA3-207ENST00000578896 A0A1W2PPK0 400 aa7.03□□□□□ -1.28
GGA3-207ENST00000578896 MAGEA13PA6NCF6 341 aa7.03□□□□□ -1.28
GGA3-207ENST00000578896 C15orf65H3BRN8 121 aa7.03□□□□□ -1.28
GGA3-207ENST00000578896 LALBAP00709 142 aa7.03□□□□□ -1.28
GGA3-207ENST00000578896 RPLP1P05386 114 aaKnown RBP7.03□□□□□ -1.28
GGA3-207ENST00000578896 RAB7AP51149 207 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms