RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 Q6P435 159 aa8.22□□□□□ -1.09
GGA3-206ENST00000578773 MRGPRDQ8TDS7 321 aa8.22□□□□□ -1.09
GGA3-206ENST00000578773 WDR89Q96FK6 387 aaPredicted RBP8.22□□□□□ -1.09
GGA3-206ENST00000578773 FAM103A1Q9BTL3 118 aaKnown RBP8.22□□□□□ -1.09
GGA3-206ENST00000578773 CCDC134Q9H6E4 229 aa8.22□□□□□ -1.09
GGA3-206ENST00000578773 EXOSC4Q9NPD3 245 aaKnown RBP8.22□□□□□ -1.09
GGA3-206ENST00000578773 ARMC1Q9NVT9 282 aa8.22□□□□□ -1.09
GGA3-206ENST00000578773 SLC2A8Q9NY64 477 aa8.22□□□□□ -1.09
GGA3-206ENST00000578773 COPS3Q9UNS2 423 aa8.22□□□□□ -1.09
GGA3-206ENST00000578773 IGHV3-43A0A0B4J1X8 118 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 IGKV1-12A0A0C4DH73 117 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 TRBV2A0A0J9YWF9 115 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 C16orf90A8MZG2 172 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 SLC33A1O00400 549 aaPredicted RBP8.21□□□□□ -1.1
GGA3-206ENST00000578773 MAGEB4O15481 346 aaPredicted RBP8.21□□□□□ -1.1
GGA3-206ENST00000578773 SPRY2O43597 315 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 IGKV1D-12P01611 117 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 RBMY1A1P0DJD3 496 aaKnown RBP8.21□□□□□ -1.1
GGA3-206ENST00000578773 IGHV3-43DP0DP04 118 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 ATP6V1B1P15313 513 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 RHCEP18577 417 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 NUDT2P50583 147 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 ALDH3A2P51648 485 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 BNIP1Q12981 228 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 TSPAN31Q12999 210 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 PLEKHG7Q6ZR37 379 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 SHFQ7M4L6 423 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 OR9Q2Q8NGE9 314 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 OTULINQ96BN8 352 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 DGCR6LQ9BY27 220 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 GLS2Q9UI32 602 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 V9GYQ6 96 aa8.21□□□□□ -1.1
GGA3-206ENST00000578773 IGLL5B9A064 214 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 NPIPB11E5RHQ5 1161 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 MRASO14807 208 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 SRSF10O75494 262 aaKnown RBP8.2□□□□□ -1.1
GGA3-206ENST00000578773 SOX14O95416 240 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 H2AFXP16104 143 aaPredicted RBP8.2□□□□□ -1.1
GGA3-206ENST00000578773 ATF4P18848 351 aaPredicted RBP8.2□□□□□ -1.1
GGA3-206ENST00000578773 GUCA2BQ16661 112 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 OR8H1Q8NGG4 311 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 PLPPR1Q8TBJ4 325 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 GNPDA2Q8TDQ7 276 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.2□□□□□ -1.1
GGA3-206ENST00000578773 RFT1Q96AA3 541 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 TSSK6Q9BXA6 273 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 PARP12Q9H0J9 701 aaKnown RBP8.2□□□□□ -1.1
GGA3-206ENST00000578773 HMG20AQ9NP66 347 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 INTS9Q9NV88 658 aaKnown RBP8.2□□□□□ -1.1
GGA3-206ENST00000578773 CHCHD3Q9NX63 227 aaKnown RBP8.2□□□□□ -1.1
GGA3-206ENST00000578773 CNOT2Q9NZN8 540 aaKnown RBP8.2□□□□□ -1.1
GGA3-206ENST00000578773 MRM2Q9UI43 246 aaKnown RBP8.2□□□□□ -1.1
GGA3-206ENST00000578773 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
GGA3-206ENST00000578773 LOC102724200A0A096LPH7 203 aaPredicted RBP8.19□□□□□ -1.1
GGA3-206ENST00000578773 FCN1O00602 326 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 MITFO75030 526 aaPredicted RBP8.19□□□□□ -1.1
GGA3-206ENST00000578773 GADD45GO95257 159 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 TRGV3P03979 118 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 CSN2P05814 226 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 ZNF44P15621 663 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 BMI1P35226 326 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 CRIP2P52943 208 aaPredicted RBP8.19□□□□□ -1.1
GGA3-206ENST00000578773 CDC42P60953 191 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 APOFQ13790 326 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 ENTHD1Q8IYW4 607 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 IQCF1Q8N6M8 205 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 C2CD4CQ8TF44 421 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 C7orf26Q96N11 449 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 SH3GL1Q99961 368 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 BTBD10Q9BSF8 475 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 OR51V1Q9H2C8 321 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 LINC00574Q9H8X3 128 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 ZNF581Q9P0T4 197 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 NUFIP1Q9UHK0 495 aaKnown RBP8.19□□□□□ -1.1
GGA3-206ENST00000578773 GTF2A1LQ9UNN4 478 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 FAM32AQ9Y421 112 aaKnown RBP8.19□□□□□ -1.1
GGA3-206ENST00000578773 NUBP2Q9Y5Y2 271 aa8.19□□□□□ -1.1
GGA3-206ENST00000578773 MEIKINA0A087WXM9 373 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 FUOMA2VDF0 154 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 SH2D1BO14796 132 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 ALOX5APP20292 161 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 ZP3P21754 424 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 ACTBP60709 375 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 LSAMPQ13449 338 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 RBMS2Q15434 407 aaKnown RBP8.18□□□□□ -1.1
GGA3-206ENST00000578773 ODF4Q2M2E3 257 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 C5orf64Q2M2E5 130 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 SPIN3Q5JUX0 258 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 COMMD4Q9H0A8 199 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 RANGRFQ9HD47 186 aaPredicted RBP8.18□□□□□ -1.1
GGA3-206ENST00000578773 IL20Q9NYY1 176 aa8.18□□□□□ -1.1
GGA3-206ENST00000578773 RBMXL2O75526 392 aaKnown RBP8.17□□□□□ -1.1
GGA3-206ENST00000578773 INAFM2P0DMQ5 153 aa8.17□□□□□ -1.1
GGA3-206ENST00000578773 FCGR2BP31994 310 aaPredicted RBP8.17□□□□□ -1.1
GGA3-206ENST00000578773 CX3CL1P78423 397 aa8.17□□□□□ -1.1
GGA3-206ENST00000578773 LIPEQ05469 1076 aa8.17□□□□□ -1.1
GGA3-206ENST00000578773 CDK5R1Q15078 307 aa8.17□□□□□ -1.1
GGA3-206ENST00000578773 DEFB114Q30KQ6 69 aa8.17□□□□□ -1.1
GGA3-206ENST00000578773 UNQ5815/PRO19632Q6UWF5 114 aa8.17□□□□□ -1.1
GGA3-206ENST00000578773 LAX1Q8IWV1 398 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms