RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 IGHV3-13P01766 116 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 PMP2P02689 132 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 ACAA1P09110 424 aaPredicted RBP8.54□□□□□ -1.04
SS18-210ENST00000578700 EGR1P18146 543 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 NAT1P18440 290 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 IL2RGP31785 369 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 HRH1P35367 487 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 SERPINF1P36955 418 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 NPBWR2P48146 333 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 RRAS2P62070 204 aaPredicted RBP8.54□□□□□ -1.04
SS18-210ENST00000578700 NKPD1Q17RQ9 610 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 FAM76BQ5HYJ3 339 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 SPIN3Q5JUX0 258 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 VAX1Q5SQQ9 334 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 OR2Z1Q8NG97 314 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 OR4S1Q8NGB4 309 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 MED30Q96HR3 178 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 FGF23Q9GZV9 251 aaPredicted RBP8.54□□□□□ -1.04
SS18-210ENST00000578700 PPA2Q9H2U2 334 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 OR51J1Q9H342 316 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 ZNF286AQ9HBT8 521 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 SLC2A8Q9NY64 477 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 AK3Q9UIJ7 227 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 ANAPC10Q9UM13 185 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 TRRAPQ9Y4A5 3859 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 hCG_1807616A0A1W2PRN6 198 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 TMEM82A0PJX8 343 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 C7orf66A4D0T2 115 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 SNRPGP15A8MWD9 76 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 F5H5P2 479 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 IL5P05113 134 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 ZNF44P15621 663 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 ECI1P42126 302 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 ZNF154Q13106 437 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 GRK1Q15835 563 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 ALKBH6Q3KRA9 238 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 C4orf46Q504U0 113 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 CD276Q5ZPR3 534 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 OR52W1Q6IF63 320 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 BATF2Q8N1L9 274 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 ZCCHC24Q8N2G6 241 aaKnown RBP8.53□□□□□ -1.04
SS18-210ENST00000578700 LINC01356Q8N9X3 169 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 POC1AQ8NBT0 407 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 OR5AP2Q8NGF4 316 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 OR4D10Q8NGI6 311 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 DIRC2Q96SL1 478 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 SYT3Q9BQG1 590 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 SULT4A1Q9BR01 284 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 RAB1BQ9H0U4 201 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 MSL2Q9HCI7 577 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 NECAP2Q9NVZ3 263 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 ZNF69Q9UC07 566 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 ZDHHC8Q9ULC8 765 aa8.53□□□□□ -1.04
SS18-210ENST00000578700 CMYA5Q8N3K9 4069 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 IGLV3-9A0A075B6K5 115 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 KIR2DS1A0A191URI9 304 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 POM121CA8CG34 1229 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 H0YL77 283 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 MLNRO43193 412 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 NOS1APO75052 506 aaPredicted RBP8.52□□□□□ -1.05
SS18-210ENST00000578700 FCGR3AP08637 254 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 OR4A8P0C604 315 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 PGA5P0DJD9 388 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 DAOP14920 347 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 MDH2P40926 338 aaKnown RBP8.52□□□□□ -1.05
SS18-210ENST00000578700 GLP1RP43220 463 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 KIR2DS4P43632 304 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 EIF2B2P49770 351 aaKnown RBP8.52□□□□□ -1.05
SS18-210ENST00000578700 ZNF81P51508 661 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 TAS2R31P59538 309 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 KIR2DS1Q14954 304 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 CDK10Q15131 360 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 MICBQ29980 383 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 SMIM21Q3B7S5 101 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 SIGIRRQ6IA17 410 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 C11orf88Q6PI97 169 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 GLDNQ6ZMI3 551 aaPredicted RBP8.52□□□□□ -1.05
SS18-210ENST00000578700 TMED4Q7Z7H5 227 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 ZDHHC22Q8N966 263 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 OR6F1Q8NGZ6 308 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 TERB2Q8NHR7 220 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 SGMS2Q8NHU3 365 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 MRPL24Q96A35 216 aaKnown RBP8.52□□□□□ -1.05
SS18-210ENST00000578700 ELMOD3Q96FG2 381 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 ZNF488Q96MN9 340 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 SLC6A7Q99884 636 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 NRIP2Q9BQI9 281 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 ALX4Q9H161 411 aaPredicted RBP8.52□□□□□ -1.05
SS18-210ENST00000578700 GHITMQ9H3K2 345 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 IFT22Q9H7X7 185 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 FN3KRPQ9HA64 309 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 BEX1Q9HBH7 125 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 MYOZ1Q9NP98 299 aaPredicted RBP8.52□□□□□ -1.05
SS18-210ENST00000578700 CA10Q9NS85 328 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 C1orf123Q9NWV4 160 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 ETAA1Q9NY74 926 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 RASL12Q9NYN1 266 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 TAAR3PQ9P1P4 343 aa8.52□□□□□ -1.05
SS18-210ENST00000578700 ANXA10Q9UJ72 324 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms