RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 ODF3BA8MYP8 253 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 MCRIP1C9JLW8 97 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 TOR1AO14656 332 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 SC5DO75845 299 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 MDKP21741 143 aaPredicted RBP15.82■□□□□ 0.12
SS18-209ENST00000578595 HTR2CP28335 458 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 COMPP49747 757 aaPredicted RBP15.82■□□□□ 0.12
SS18-209ENST00000578595 GP2P55259 537 aaKnown RBP15.82■□□□□ 0.12
SS18-209ENST00000578595 RBM39Q14498 530 aaKnown RBP15.82■□□□□ 0.12
SS18-209ENST00000578595 NKAPLQ5M9Q1 402 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 TMEM91Q6ZNR0 172 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 ABHD12Q8N2K0 398 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 TMEM104Q8NE00 496 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 OR11H6Q8NGC7 330 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 OR4F5Q8NH21 305 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 HILPDAQ9Y5L2 63 aa15.82■□□□□ 0.12
SS18-209ENST00000578595 AIPO00170 330 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 MRPS14O60783 128 aaKnown RBP15.81■□□□□ 0.12
SS18-209ENST00000578595 UBBP0CG47 229 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 CFPP27918 469 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 GDNFP39905 211 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 FABP5Q01469 135 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 OR10K2Q6IF99 312 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 RAB12Q6IQ22 244 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 RFESDQ8TAC1 157 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 CCDC107Q8WV48 283 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 KCNK15Q9H427 330 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 IFT22Q9H7X7 185 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 ETAA1Q9NY74 926 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 C1RLQ9NZP8 487 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 GHRLQ9UBU3 117 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 AK6Q9Y3D8 172 aaKnown RBP15.81■□□□□ 0.12
SS18-209ENST00000578595 PEX16Q9Y5Y5 336 aa15.81■□□□□ 0.12
SS18-209ENST00000578595 KBTBD11-OT1A0A1B0GTJ5 212 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 IGHV3-7P01780 117 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 HTR1DP28221 377 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 SSTR5P35346 364 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 P2RY14Q15391 338 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 SSX1Q16384 188 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 C17orf58Q2M2W7 97 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 SLC35E4Q6ICL7 350 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 OR6M1Q8NGM8 313 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 ZNF596Q8TC21 504 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 TMEM59Q9BXS4 323 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 YTHDF1Q9BYJ9 559 aaKnown RBP15.8■□□□□ 0.12
SS18-209ENST00000578595 BEX1Q9HBH7 125 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 ZNF286AQ9HBT8 521 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 DNHD1Q96M86 4753 aa15.8■□□□□ 0.12
SS18-209ENST00000578595 UBE2QL1A1L167 161 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 F2RL2O00254 374 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 IL1AP01583 271 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 MYL9P24844 172 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 GNG10P50151 68 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 RPL15P61313 204 aaKnown RBP15.79■□□□□ 0.12
SS18-209ENST00000578595 RTN4RL2Q86UN3 420 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 LYPD6Q86Y78 171 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 SPARTQ8N0X7 666 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 DYNAPQ8N1N2 210 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 UBALD1Q8TB05 177 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 FCGR1BQ92637 280 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 MALSU1Q96EH3 234 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 AJUBAQ96IF1 538 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 KIRREL1Q96J84 757 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 Q96M66 194 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 MEGF9Q9H1U4 602 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 NDUFB11Q9NX14 153 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 IDI2-AS1Q9NZ38 188 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 TRAPPC2LQ9UL33 140 aa15.79■□□□□ 0.12
SS18-209ENST00000578595 CCRL2O00421 344 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 VSIG8P0DPA2 414 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 PRRX1P54821 245 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 RAB11BQ15907 218 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 C1orf100Q5SVJ3 147 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 MINOS1Q5TGZ0 78 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 KCNG3Q8TAE7 436 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 LEAP2Q969E1 77 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 NEDD4LQ96PU5 975 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 LRRC42Q9Y546 428 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 MINOS1-NBL1R4GNA1 71 aa15.78■□□□□ 0.12
SS18-209ENST00000578595 FAM90A10PA6NDY2 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A18PA6NE21 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A16PA6NEW6 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A20PA6NIJ5 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A8PA6NJQ4 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A7PA6NKC0 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A22PA8MWA6 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A12PA8MX19 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A5PA8MXJ8 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A23PA8MXZ1 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 BPNT1O95861 308 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A15PP0C7V4 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A13PP0C7W8 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A14PP0C7W9 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FAM90A24PP0C7X0 464 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 FUT3P21217 361 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 RAB13P51153 203 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 RELBQ01201 579 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 ZNF773Q6PK81 442 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 PRR18Q8N4B5 295 aa15.77■□□□□ 0.12
SS18-209ENST00000578595 OR4P4Q8NGL7 312 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms