RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 TUSC2O75896 110 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 PTBP3O95758 552 aaKnown RBP9.42□□□□□ -0.9
SKA2-204ENST00000578519 HOXB5P09067 269 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 FAM87AP0C7U9 286 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 IRF2P14316 349 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 CXCL2P19875 107 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 SSTR2P30874 369 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 HTR2BP41595 481 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 LUMP51884 338 aaPredicted RBP9.42□□□□□ -0.9
SKA2-204ENST00000578519 SUPT4H1P63272 117 aaKnown RBP9.42□□□□□ -0.9
SKA2-204ENST00000578519 NKX6-1P78426 367 aaPredicted RBP9.42□□□□□ -0.9
SKA2-204ENST00000578519 FAM27E3Q08E93 113 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 ANKRD55Q3KP44 614 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 PRSS54Q6PEW0 395 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 WDR82Q6UXN9 313 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 WDR86Q86TI4 376 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 OR8H3Q8N146 312 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 GAPTQ8N292 157 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 RPRMLQ8N4K4 120 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 ZBTB34Q8NCN2 500 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 FAM216AQ8WUB2 273 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 KRTAP4-6Q9BYQ5 205 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 COQ3Q9NZJ6 369 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 OR14J1Q9UGF5 321 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 TNFSF18Q9UNG2 199 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 OR2W1Q9Y3N9 320 aa9.42□□□□□ -0.9
SKA2-204ENST00000578519 TRBV6-7A0A0A0MS04 114 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 TRAV14DV4A0A0A6YYC5 116 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 TRGV8A0A0C4DH27 118 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 C3orf85A0A1B0GTC6 90 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 TAAR5O14804 337 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 SCTP09683 121 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 RPS2P15880 293 aaKnown RBP9.41□□□□□ -0.9
SKA2-204ENST00000578519 ASCL1P50553 236 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 TMEM187Q14656 261 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 IAH1Q2TAA2 248 aaPredicted RBP9.41□□□□□ -0.9
SKA2-204ENST00000578519 IGSF11Q5DX21 431 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 ZNF695Q8IW36 515 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 ST6GALNAC3Q8NDV1 305 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 OR5D13Q8NGL4 314 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 LRRC20Q8TCA0 184 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 LRRC29Q8WV35 223 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 SECTM1Q8WVN6 248 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 DCUN1D4Q92564 292 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 NINJ1Q92982 152 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 IL22RA2Q969J5 263 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 GALMQ96C23 342 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 MEGF10Q96KG7 1140 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 DNTTIP1Q9H147 329 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 MSL2Q9HCI7 577 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 RDH8Q9NYR8 311 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 GSKIPQ9P0R6 139 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 ZNF581Q9P0T4 197 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 IL36RNQ9UBH0 155 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 NDRG3Q9UGV2 375 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 IL19Q9UHD0 177 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 DOCK7Q96N67 2140 aa9.41□□□□□ -0.9
SKA2-204ENST00000578519 DLL1O00548 723 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 PHF1O43189 567 aaPredicted RBP9.4□□□□□ -0.9
SKA2-204ENST00000578519 BCL2L11O43521 198 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 ATG12O94817 140 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 OR5AC1P0C628 307 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 TNFRSF1AP19438 455 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 GZMHP20718 246 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 IL2RGP31785 369 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 TNFAIP6P98066 277 aaPredicted RBP9.4□□□□□ -0.9
SKA2-204ENST00000578519 MSMO1Q15800 293 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 LRRC37A5PQ49AS3 106 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 PHLDA2Q53GA4 152 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 CLLU1Q5K131 121 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 PRAMEF6Q5VXH4 476 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 GGNBP1Q5YKI7 109 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 THOC7Q6I9Y2 204 aaKnown RBP9.4□□□□□ -0.9
SKA2-204ENST00000578519 EIF5AL1Q6IS14 154 aaKnown RBP9.4□□□□□ -0.9
SKA2-204ENST00000578519 VHLLQ6RSH7 139 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 Q6ZR03 302 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 WFDC8Q8IUA0 241 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 C11orf53Q8IXP5 236 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 H1FOOQ8IZA3 346 aaPredicted RBP9.4□□□□□ -0.9
SKA2-204ENST00000578519 OR10V1Q8NGI7 309 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 SCARB1Q8WTV0 552 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 TMEM171Q8WVE6 324 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 MRPL24Q96A35 216 aaKnown RBP9.4□□□□□ -0.9
SKA2-204ENST00000578519 PHYHIPLQ96FC7 376 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 ABHD14BQ96IU4 210 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 SNX22Q96L94 193 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 LURAP1Q96LR2 239 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 ARPC5LQ9BPX5 153 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 GSX2Q9BZM3 304 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 EGLN1Q9GZT9 426 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 NCOR1P1Q9H4R4 102 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 ESRP2Q9H6T0 727 aaKnown RBP9.4□□□□□ -0.9
SKA2-204ENST00000578519 HEXA-AS1Q9H8Q6 139 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 PLEKHA2Q9HB19 425 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 ZC4H2Q9NQZ6 224 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 MBNL3Q9NUK0 354 aaKnown RBP9.4□□□□□ -0.9
SKA2-204ENST00000578519 UFSP2Q9NUQ7 469 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 KIF25Q9UIL4 384 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 SH3BGRL2Q9UJC5 107 aa9.4□□□□□ -0.9
SKA2-204ENST00000578519 FZR1Q9UM11 496 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms