RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 ALG8Q9BVK2 526 aa3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 JAM3Q9BX67 310 aa3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 PARP12Q9H0J9 701 aaKnown RBP3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 KLK15Q9H2R5 256 aa3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 IFT22Q9H7X7 185 aa3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 EXOSC4Q9NPD3 245 aaKnown RBP3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 GAR1Q9NY12 217 aaKnown RBP3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 PLA2G2EQ9NZK7 142 aa3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 RCC2Q9P258 522 aaKnown RBP3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 FBXO7Q9Y3I1 522 aa3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 TSSC4Q9Y5U2 329 aaPredicted RBP3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 DNAH1Q9P2D7 4330 aa3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 HYDINQ4G0P3 5121 aa3.48□□□□□ -1.85
PPP4R1-209ENST00000578329 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 TRGV10A0A0A0MS01 117 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 TRBV5-7A0A0A0MS05 114 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 IGHV3-43A0A0B4J1X8 118 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 IGHV1-3A0A0C4DH29 117 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 KRTAP4-8A0A0G2JLE6 195 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 TRBV5-5A0A0J9YX44 114 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 A0A1W2PPH5 198 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 DAPL1A0PJW8 107 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 LEUTXA8MZ59 168 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 C12orf77C9JDV5 145 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 H0YJX3 145 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 SH2D1BO14796 132 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 GEMIN2O14893 280 aaKnown RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 DEGS1O15121 323 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 SULT1B1O43704 296 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 XPNPEP2O43895 674 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 CYB5AP00167 134 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 MT-ND4P03905 459 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 IGHV3-43DP0DP04 118 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 CD37P11049 281 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 EGR2P11161 476 aaPredicted RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 PRKACBP22694 351 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 CNTFRP26992 372 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 PPIFP30405 207 aaKnown RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 PTGFRP43088 359 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 GPR12P47775 334 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 SOX2P48431 317 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 GNG10P50151 68 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 ALDH3A2P51648 485 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 LUMP51884 338 aaPredicted RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 ZNF137PP52743 207 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 RBM11P57052 281 aaKnown RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 SSBP2P81877 361 aaPredicted RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 NDPQ00604 133 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 ZNF816Q0VGE8 651 aaPredicted RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 FHL3Q13643 280 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 HNF4GQ14541 408 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 INSL4Q14641 139 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 GNMTQ14749 295 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 LTC4SQ16873 150 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 CT45A1Q5HYN5 189 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 NHLRC3Q5JS37 347 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 KRBOX4Q5JUW0 171 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 VAX1Q5SQQ9 334 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 C6orf141Q5SZD1 244 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 C1orf146Q5VVC0 180 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 DMKNQ6E0U4 476 aaPredicted RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 ZBTB49Q6ZSB9 765 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 C16orf82Q7Z2V1 217 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 KCTD20Q7Z5Y7 419 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 LINC00311Q8N616 119 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 SUMF2Q8NBJ7 301 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 CHST4Q8NCG5 386 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 CCDC54Q8NEL0 328 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 OR13C3Q8NGS6 347 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 CT45A3Q8NHU0 189 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 TRUB1Q8WWH5 349 aaKnown RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 NR1H4Q96RI1 486 aaPredicted RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 B9D2Q9BPU9 175 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 ZNF251Q9BRH9 671 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 KCNK15Q9H427 330 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 PLEKHA1Q9HB21 404 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 FGF20Q9NP95 211 aaPredicted RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 ABCB10Q9NRK6 738 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 TPSG1Q9NRR2 321 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 FAM118AQ9NWS6 357 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 IDI2-AS1Q9NZ38 188 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 IL36GQ9NZH8 169 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 H2AFY2Q9P0M6 372 aaPredicted RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 ZNF107Q9UII5 783 aaPredicted RBP3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 PITPNC1Q9UKF7 332 aa3.47□□□□□ -1.85
PPP4R1-209ENST00000578329 SORL1Q92673 2214 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 MEIKINA0A087WXM9 373 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 A0A0A6YYD4 124 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 hCG_1809904A0A1W2PP81 198 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 A0A1W2PPE2 198 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 A0A1W2PR64 198 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 A0A1W2PRV1 198 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 PSMB11A5LHX3 300 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 FAM90A10PA6NDY2 464 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 FOXI3A8MTJ6 420 aaPredicted RBP3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 OOSP1A8MZH6 123 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 G3V318 75 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 DYNC1I1O14576 645 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 GPX5O75715 221 aa3.46□□□□□ -1.86
PPP4R1-209ENST00000578329 SC5DO75845 299 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms