RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 RNF212BA8MTL3 300 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 IFNL4K9M1U5 179 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 PHF1O43189 567 aaPredicted RBP7.03□□□□□ -1.28
SKA2-203ENST00000578105 SYNGR1O43759 233 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 SEC11BP0C7V7 166 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 CCL2P13500 99 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 VDAC1P21796 283 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 CA6P23280 308 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 LMO1P25800 156 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 GNRHRP30968 328 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 SULT1A2P50226 295 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 FXYD4P59646 89 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 BAXQ07812 192 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 ZNF266Q14584 549 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 OR8G1Q15617 311 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 RSPO4Q2I0M5 234 aaPredicted RBP7.03□□□□□ -1.28
SKA2-203ENST00000578105 ZNF718Q3SXZ3 478 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 KRTCAP3Q53RY4 240 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 MBNL2Q5VZF2 373 aaKnown RBP7.03□□□□□ -1.28
SKA2-203ENST00000578105 OR2T2Q6IF00 324 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 Q6P435 159 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 VASH2Q86V25 355 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 ZNF695Q8IW36 515 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 H1FOOQ8IZA3 346 aaPredicted RBP7.03□□□□□ -1.28
SKA2-203ENST00000578105 BHLHE23Q8NDY6 225 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 OR4D5Q8NGN0 318 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 OR1J1Q8NGS3 322 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 OR10Z1Q8NGY1 313 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 OR10J5Q8NHC4 309 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 C17orf50Q8WW18 174 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 MRPL24Q96A35 216 aaKnown RBP7.03□□□□□ -1.28
SKA2-203ENST00000578105 RRNAD1Q96FB5 475 aaKnown RBP7.03□□□□□ -1.28
SKA2-203ENST00000578105 SMIM8Q96KF7 97 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 NRIP2Q9BQI9 281 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 ARV1Q9H2C2 271 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 LIME1Q9H400 295 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 TAF9BQ9HBM6 251 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 PARP11Q9NR21 331 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 MMP26Q9NRE1 261 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 MBNL3Q9NUK0 354 aaKnown RBP7.03□□□□□ -1.28
SKA2-203ENST00000578105 UBE2J1Q9Y385 318 aaPredicted RBP7.03□□□□□ -1.28
SKA2-203ENST00000578105 SPEF1Q9Y4P9 236 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 MED13Q9UHV7 2174 aa7.03□□□□□ -1.28
SKA2-203ENST00000578105 TRAV24A0A0B4J272 114 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 A0A1B0GU03 582 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 C1QTNF9BB2RNN3 333 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.02□□□□□ -1.29
SKA2-203ENST00000578105 ATG12O94817 140 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 SCAF4O95104 1147 aaKnown RBP7.02□□□□□ -1.29
SKA2-203ENST00000578105 ZNF44P15621 663 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 ZNF250P15622 560 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 GCH1P30793 250 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 TIMP3P35625 211 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 NKX2-1P43699 371 aaPredicted RBP7.02□□□□□ -1.29
SKA2-203ENST00000578105 IDH3GP51553 393 aaPredicted RBP7.02□□□□□ -1.29
SKA2-203ENST00000578105 HMGN3Q15651 99 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 DEFB109BQ30KR1 87 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 TMEM268Q5VZI3 342 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 SLC35E4Q6ICL7 350 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 PCSK4Q6UW60 755 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 ZNF497Q6ZNH5 498 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 Q6ZS92 163 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 TBC1D26Q86UD7 250 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 WDR31Q8NA23 367 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 SCCPDHQ8NBX0 429 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 SLC25A40Q8TBP6 338 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 LSM10Q969L4 123 aaKnown RBP7.02□□□□□ -1.29
SKA2-203ENST00000578105 OR2J1Q9GZK6 312 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 RAB9BQ9NP90 201 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 TAAR3PQ9P1P4 343 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 LPAR3Q9UBY5 353 aa7.02□□□□□ -1.29
SKA2-203ENST00000578105 PURGQ9UJV8 347 aaKnown RBP7.02□□□□□ -1.29
SKA2-203ENST00000578105 STRAPQ9Y3F4 350 aaKnown RBP7.02□□□□□ -1.29
SKA2-203ENST00000578105 CACNA1GO43497 2377 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 TMEM30CPA0ZSE6 113 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 OR5H1A6NKK0 313 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 MPTX1A8MV57 137 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 TM4SF5O14894 197 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 NXPH2O95156 264 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 LY86O95711 162 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 PTBP3O95758 552 aaKnown RBP7.01□□□□□ -1.29
SKA2-203ENST00000578105 OR2H2O95918 312 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 CGAP01215 116 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 MBPP02686 304 aaPredicted RBP7.01□□□□□ -1.29
SKA2-203ENST00000578105 SCTP09683 121 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 FAM157CP0CG43 387 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 F2RP25116 425 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 CFHR2P36980 270 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 F2RL1P55085 397 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 TMEM33P57088 247 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 RPS23P62266 143 aaKnown RBP7.01□□□□□ -1.29
SKA2-203ENST00000578105 PJVKQ0ZLH3 352 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 PSG7Q13046 419 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 ZNF154Q13106 437 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 PHLDA2Q53GA4 152 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 IGSF11Q5DX21 431 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 BEX5Q5H9J7 111 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 TIMM23BQ5SRD1 257 aa7.01□□□□□ -1.29
SKA2-203ENST00000578105 ZNF324BQ6AW86 544 aaPredicted RBP7.01□□□□□ -1.29
SKA2-203ENST00000578105 Q6ZPA2 131 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms