RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CGB3P0DN86 165 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 CGB7P0DN87 165 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 USF1P22415 310 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 CEBPDP49716 269 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 TAS2R20P59543 309 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 MRPS10P82664 201 aaKnown RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 MEF2CQ06413 473 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SCN1BQ07699 218 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 LSAMPQ13449 338 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 PAN3Q58A45 887 aaKnown RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 LRRC10Q5BKY1 277 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 TMEM69Q5SWH9 247 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 ATAD3CQ5T2N8 411 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 RSBN1Q5VWQ0 802 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 WDR25Q64LD2 544 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 NLRC3Q7RTR2 1065 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 FAM216BQ8N7L0 139 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 OR8B3Q8NGG8 313 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 S100ZQ8WXG8 99 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DACT3Q96B18 629 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 RAB39BQ96DA2 213 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 OR8B2Q96RD0 313 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SCPEP1Q9HB40 452 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 AKIP1Q9NQ31 210 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 MBNL3Q9NUK0 354 aaKnown RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 EXTL2Q9UBQ6 330 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SLC25A10Q9UBX3 287 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 OPN4Q9UHM6 478 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 V9GYH0 126 aa9.21□□□□□ -0.94
CDK5RAP3-204ENST00000577664 TRBV23-1A0A0A0MS06 115 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 IGHV4-61A0A0C4DH41 118 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 A0A1B0GW55 424 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SIRPB1O00241 398 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 GSTZ1O43708 216 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DUX4L2P0CJ85 424 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DUX4L3P0CJ86 424 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DUX4L4P0CJ87 422 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DUX4L5P0CJ88 424 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DUX4L6P0CJ89 424 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DUX4L7P0CJ90 424 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 RPS2P15880 293 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 GNB3P16520 340 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 NAT1P18440 290 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 GZMHP20718 246 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DTYMKP23919 212 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SNU13P55769 128 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 PAX2Q02962 417 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 GRK1Q15835 563 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 CARTPTQ16568 116 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SPANXN2Q5MJ10 180 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 CD276Q5ZPR3 534 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DUX4L9Q6RFH8 374 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 BPIFB2Q8N4F0 458 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 PLPPR1Q8TBJ4 325 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 GPX8Q8TED1 209 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 COQ2Q96H96 371 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DCTN5Q9BTE1 182 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 REG4Q9BYZ8 158 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 CHST6Q9GZX3 395 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DUX4Q9UBX2 424 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 LPAR3Q9UBY5 353 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 AK3Q9UIJ7 227 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 ANAPC10Q9UM13 185 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 PCDHB10Q9UN67 800 aa9.2□□□□□ -0.94
CDK5RAP3-204ENST00000577664 DOCK11Q5JSL3 2073 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 MALRD1Q5VYJ5 2156 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 ISPDA4D126 451 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 GABARAPH6UMI1 98 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SSX5O60225 188 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 TFF1P04155 84 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 LIPFP07098 398 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SELLP14151 372 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 PRSS3P35030 304 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 CBX5P45973 191 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 P2RX3P56373 397 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SSBP1Q04837 148 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 AESQ08117 197 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 ZNF79Q15937 498 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 OLFML2AQ68BL7 652 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 BRICD5Q6PL45 260 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 C1orf122Q6ZSJ8 110 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 GDPD3Q7L5L3 318 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 MFSD4AQ8N468 514 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 ZNF565Q8N9K5 539 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 ASCC1Q8N9N2 400 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 MRPL30Q8TCC3 161 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 SSBP3Q9BWW4 388 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 PPA2Q9H2U2 334 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 ETAA1Q9NY74 926 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 CLN8Q9UBY8 286 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 ZNF107Q9UII5 783 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 MGAT4AQ9UM21 535 aa9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 UBE2J1Q9Y385 318 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 RBMX2Q9Y388 322 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 YLPM1P49750 1951 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-204ENST00000577664 A0A0G2JMP0 313 aa9.18□□□□□ -0.94
CDK5RAP3-204ENST00000577664 A0A0X1KG70 313 aa9.18□□□□□ -0.94
CDK5RAP3-204ENST00000577664 TMEM30CPA0ZSE6 113 aa9.18□□□□□ -0.94
CDK5RAP3-204ENST00000577664 UBE2QL1A1L167 161 aa9.18□□□□□ -0.94
CDK5RAP3-204ENST00000577664 RNF223E7ERA6 249 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms