RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 H3BNX3 289 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 M0R129 80 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 HSPB6O14558 160 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 MPZL2O60487 215 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 SAP30O75446 220 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 KDM4BO94953 1096 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 KRT8P05787 483 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 CSN2P05814 226 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 RAP2AP10114 183 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 PSMB8P28062 276 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 C21orf33P30042 268 aaPredicted RBP7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 HTR1FP30939 366 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 GLP1RP43220 463 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 CRISP1P54107 249 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 F2RL1P55085 397 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 GNB1P62873 340 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 CDK5R1Q15078 307 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 SRSF7Q16629 238 aaKnown RBP eCLIP7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 OR10X1Q8NGY0 326 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 FGGYQ96C11 551 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 ISOC1Q96CN7 298 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 KCTD7Q96MP8 289 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 S1PR3Q99500 378 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 RASL11BQ9BPW5 248 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 ISYNA1Q9NPH2 558 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 C8orf4Q9NR00 106 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 CLN6Q9NWW5 311 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 H2AFY2Q9P0M6 372 aaPredicted RBP7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 KIF25Q9UIL4 384 aa7.85□□□□□ -1.15
NPLOC4-220ENST00000576940 HERC2O95714 4834 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 METTL15A6NJ78 407 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 NPIPB11E5RHQ5 1161 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 I3L521 148 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 OVOL1O14753 267 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 HSD17B6O14756 317 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 IL1AP01583 271 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 GAPDHP04406 335 aaKnown RBP7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 OR8U8P0C7N1 319 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 VDAC1P21796 283 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 ZNF616Q08AN1 781 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 ZNF816Q0VGE8 651 aaPredicted RBP7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 GK3PQ14409 553 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 PTGES3Q15185 160 aaKnown RBP7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 RCN1Q15293 331 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 AADACL4Q5VUY2 407 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 LHFPL2Q6ZUX7 228 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 TCEANCQ8N8B7 351 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 ZNF491Q8N8L2 437 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 OR51T1Q8NGJ9 327 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 OR2T10Q8NGZ9 312 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 MRGPRDQ8TDS7 321 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 PP6455Q8WZ26 134 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 DLX4Q92988 240 aaPredicted RBP7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 OPALINQ96PE5 141 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 NR1H4Q96RI1 486 aaPredicted RBP7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 MNTQ99583 582 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 ALX4Q9H161 411 aaPredicted RBP7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 VCX3BQ9H321 246 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 LRRC42Q9Y546 428 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 WSB1Q9Y6I7 421 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 ALMS1Q8TCU4 4167 aa7.84□□□□□ -1.15
NPLOC4-220ENST00000576940 LOC107986453A0A1B0GWG9 222 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 A0A1W2PQL4 384 aaPredicted RBP7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 MAGEA13PA6NCF6 341 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 G3V318 75 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 LDLRAD4O15165 306 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 APOL3O95236 402 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 FCGR1AP12314 374 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 ANXA8P13928 327 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 PRKACBP22694 351 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 SSTR5P35346 364 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 VHLP40337 213 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 KIR3DL2P43630 455 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 VEGFCP49767 419 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 SLURP1P55000 103 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 EFNB1P98172 346 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 NXNL2Q5VZ03 156 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 ADGRG5Q8IZF4 528 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 Q8N1Y9 231 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 PQLC1Q8N2U9 271 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 CHST4Q8NCG5 386 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 CCDC54Q8NEL0 328 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 MYOZ3Q8TDC0 251 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 CANT1Q8WVQ1 401 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 RNF166Q96A37 237 aaPredicted RBP7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 CCDC124Q96CT7 223 aaKnown RBP7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 C10orf35Q96D05 121 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 UBE2E2Q96LR5 201 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 BARHL1Q9BZE3 327 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 LINC00574Q9H8X3 128 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 NEK6Q9HC98 313 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 VSIG4Q9Y279 399 aa7.83□□□□□ -1.16
NPLOC4-220ENST00000576940 TRAV24A0A0B4J272 114 aa7.82□□□□□ -1.16
NPLOC4-220ENST00000576940 MOSP00540 346 aa7.82□□□□□ -1.16
NPLOC4-220ENST00000576940 IGF1P05019 195 aa7.82□□□□□ -1.16
NPLOC4-220ENST00000576940 OCM2P0CE71 109 aa7.82□□□□□ -1.16
NPLOC4-220ENST00000576940 OCMP0CE72 109 aaPredicted RBP7.82□□□□□ -1.16
NPLOC4-220ENST00000576940 IGHV4-30-4P0DP06 118 aa7.82□□□□□ -1.16
NPLOC4-220ENST00000576940 PPIFP30405 207 aaKnown RBP7.82□□□□□ -1.16
NPLOC4-220ENST00000576940 SOX6P35712 828 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms