RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 RAB3CQ96E17 227 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 ARHGAP5-AS1Q96IT6 56 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 SULT4A1Q9BR01 284 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 BEX2Q9BXY8 128 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 SIRPDQ9H106 197 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 GAL3ST2Q9H3Q3 398 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 RSL24D1Q9UHA3 163 aaKnown RBP11.5□□□□□ -0.57
RPAIN-217ENST00000575711 CDC42EP3Q9UKI2 254 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 HSF4Q9ULV5 492 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 CSPG4Q6UVK1 2322 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 SMIM31A0A1B0GVY4 71 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 RAB27BO00194 218 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 MMP9P14780 707 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 SRP14P37108 136 aaKnown RBP11.49□□□□□ -0.57
RPAIN-217ENST00000575711 TMEM50BP56557 158 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 DYNC1I2Q13409 638 aaKnown RBP11.49□□□□□ -0.57
RPAIN-217ENST00000575711 MOGAT2Q3SYC2 334 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 C1orf229Q6ZS94 237 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-217ENST00000575711 IL17RELQ6ZVW7 336 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 DYRK2Q92630 601 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 SLC25A38Q96DW6 304 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 TBX15Q96SF7 602 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 FAAP24Q9BTP7 215 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 PECRQ9BY49 303 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 RBM38Q9H0Z9 239 aaKnown RBP11.49□□□□□ -0.57
RPAIN-217ENST00000575711 METTL8Q9H825 291 aaKnown RBP11.49□□□□□ -0.57
RPAIN-217ENST00000575711 TAS2R3Q9NYW6 316 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 TRAPPC2LQ9UL33 140 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 ZANQ9Y493 2812 aa11.49□□□□□ -0.57
RPAIN-217ENST00000575711 ARHGAP32A7KAX9 2087 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 DOCK11Q5JSL3 2073 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 ZNF729A6NN14 1252 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-217ENST00000575711 C17orf98A8MV24 154 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 ZNF701M0R085 212 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-217ENST00000575711 RBP4P02753 201 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 MT-ND4P03905 459 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 ARL6IP1Q15041 203 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 CHRFAM7AQ494W8 412 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 PLAC9Q5JTB6 97 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 UBE2NLQ5JXB2 153 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 MZT2AQ6P582 158 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 GAPTQ8N292 157 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 Q8N7P7 452 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 SAMD12Q8N8I0 201 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 OR13A1Q8NGR1 328 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 MRGPRDQ8TDS7 321 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 CHMP1AQ9HD42 196 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-217ENST00000575711 SIRT7Q9NRC8 400 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 CCDC59Q9P031 241 aaKnown RBP11.48□□□□□ -0.57
RPAIN-217ENST00000575711 NDUFA13Q9P0J0 144 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 COMMD3Q9UBI1 195 aa11.48□□□□□ -0.57
RPAIN-217ENST00000575711 A0A075B6Q4 140 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 A0A0A6YYH2 397 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 TRAV39A0A0B4J263 110 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 TRAV40A0A0B4J280 105 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 A6NJ64 397 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 CLPXO76031 633 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 HIST1H1DP16402 221 aaKnown RBP11.47□□□□□ -0.57
RPAIN-217ENST00000575711 GNB3P16520 340 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 GZMHP20718 246 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 PRTN3P24158 256 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 DLX6P56179 175 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 ERVFRD-1P60508 538 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 MRPS15P82914 257 aaKnown RBP11.47□□□□□ -0.57
RPAIN-217ENST00000575711 GPR157Q5UAW9 335 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 NCR3LG1Q68D85 454 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 OR4K15Q8NH41 348 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 MRPL30Q8TCC3 161 aaKnown RBP11.47□□□□□ -0.57
RPAIN-217ENST00000575711 DYNC2LI1Q8TCX1 351 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 CCDC107Q8WV48 283 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 LHX4Q969G2 390 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 CYYR1Q96J86 154 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 CMTM3Q96MX0 182 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 CMSS1Q9BQ75 279 aaKnown RBP11.47□□□□□ -0.57
RPAIN-217ENST00000575711 ABCG5Q9H222 651 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 RIMS4Q9H426 269 aaPredicted RBP11.47□□□□□ -0.57
RPAIN-217ENST00000575711 UNKLQ9H9P5 680 aaKnown RBP11.47□□□□□ -0.57
RPAIN-217ENST00000575711 DIABLOQ9NR28 239 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 AK3Q9UIJ7 227 aa11.47□□□□□ -0.57
RPAIN-217ENST00000575711 KBTBD11-OT1A0A1B0GTJ5 212 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 DPPA5A6NC42 116 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 SERPINE3A8MV23 424 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 MFNGO00587 321 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 CRLF1O75462 422 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 IGHV1-8P0DP01 117 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 SRD5A1P18405 259 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 GUCA2AQ02747 115 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 KLF17Q5JT82 389 aaPredicted RBP11.46□□□□□ -0.57
RPAIN-217ENST00000575711 C6orf183Q5T699 404 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 TRAT1Q6PIZ9 186 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 LURAP1LQ8IV03 231 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 C11orf42Q8N5U0 333 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 S100A16Q96FQ6 103 aaKnown RBP11.46□□□□□ -0.57
RPAIN-217ENST00000575711 HEXA-AS1Q9H8Q6 139 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 ZMAT3Q9HA38 289 aaKnown RBP11.46□□□□□ -0.57
RPAIN-217ENST00000575711 C12orf4Q9NQ89 552 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms