RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TRAPPC6AO75865 159 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 SCAF4O95104 1147 aaKnown RBP16.34■□□□□ 0.21
SCARF1-206ENST00000573852 P04436 131 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 UCP1P25874 307 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 KIAA0141Q14154 515 aaPredicted RBP16.34■□□□□ 0.21
SCARF1-206ENST00000573852 CPNE4Q96A23 557 aaPredicted RBP16.34■□□□□ 0.21
SCARF1-206ENST00000573852 ABHD14BQ96IU4 210 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 TMPRSS5Q9H3S3 457 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 ATXN7O15265 892 aaPredicted RBP16.34■□□□□ 0.21
SCARF1-206ENST00000573852 TNFSF12O43508 249 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 TUSC2O75896 110 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 VDAC1P21796 283 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 S100PP25815 95 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 HAAOP46952 286 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 PAX9P55771 341 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 UBE2KP61086 200 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 ZNF429Q86V71 674 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 SGCZQ96LD1 299 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 PRDM14Q9GZV8 571 aa16.34■□□□□ 0.21
SCARF1-206ENST00000573852 UNKLQ9H9P5 680 aaKnown RBP16.34■□□□□ 0.21
SCARF1-206ENST00000573852 TRBV23-1A0A0A0MS06 115 aa16.33■□□□□ 0.21
SCARF1-206ENST00000573852 LRRC3CA6NJW4 275 aa16.33■□□□□ 0.21
SCARF1-206ENST00000573852 SLC34A2O95436 690 aa16.33■□□□□ 0.21
SCARF1-206ENST00000573852 CXCL1P09341 107 aa16.33■□□□□ 0.21
SCARF1-206ENST00000573852 GPM6AP51674 278 aa16.33■□□□□ 0.21
SCARF1-206ENST00000573852 DLK1P80370 383 aa16.33■□□□□ 0.21
SCARF1-206ENST00000573852 GNPNAT1Q96EK6 184 aaPredicted RBP16.33■□□□□ 0.21
SCARF1-206ENST00000573852 ZNF407Q9C0G0 2248 aa16.33■□□□□ 0.21
SCARF1-206ENST00000573852 FREM1Q5H8C1 2179 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A10PA6NDY2 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A18PA6NE21 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A16PA6NEW6 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A20PA6NIJ5 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A8PA6NJQ4 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A7PA6NKC0 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A22PA8MWA6 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A12PA8MX19 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A5PA8MXJ8 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A23PA8MXZ1 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 IGHV2-70P01814 119 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A15PP0C7V4 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A13PP0C7W8 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A14PP0C7W9 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FAM90A24PP0C7X0 464 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 CCL2P13500 99 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 CCNOP22674 350 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 FOXO1Q12778 655 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 PRDX4Q13162 271 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 COLCA1Q6ZS62 124 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 Q8WTZ3 238 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 POM121Q96HA1 1249 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 TAAR3PQ9P1P4 343 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 RNF115Q9Y4L5 304 aa16.33■□□□□ 0.2
SCARF1-206ENST00000573852 IFITM10A6NMD0 228 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 HOXA5P20719 270 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 FGF12P61328 243 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 ELOBQ15370 118 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 SRSF7Q16629 238 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCARF1-206ENST00000573852 ZNF506Q5JVG8 444 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 CLDN23Q96B33 292 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 MTCH1Q9NZJ7 389 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 TINAGQ9UJW2 476 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 RPS18P62269 152 aaKnown RBP16.32■□□□□ 0.2
SCARF1-206ENST00000573852 BAXQ07812 192 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 AKR1C8PQ5T2L2 129 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 CLDND2Q8NHS1 167 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 DEPPQ9NTK1 212 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 WSB1Q9Y6I7 421 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 URGCP-MRPS24S4R325 110 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 A0A0G2JRQ6 117 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 DUXBA0A1W2PPF3 345 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 HSPB1P04792 205 aaKnown RBP16.32■□□□□ 0.2
SCARF1-206ENST00000573852 CEACAM1P13688 526 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 ERVFRD-1P60508 538 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 Q0VFX4 171 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 C9orf135Q5VTT2 229 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 ZNF600Q6ZNG1 722 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 TDHQ8IZJ6 230 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 NEK7Q8TDX7 302 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 GGACTQ9BVM4 153 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 REPIN1Q9BWE0 567 aaKnown RBP16.32■□□□□ 0.2
SCARF1-206ENST00000573852 BCL2L14Q9BZR8 327 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 CALHM2Q9HA72 323 aa16.32■□□□□ 0.2
SCARF1-206ENST00000573852 A0A087WWC5 75 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 CYTIPO60759 359 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 MMP9P14780 707 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 FOLR3P41439 243 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 P4HA3Q7Z4N8 544 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 ATP5SQ99766 215 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 TOLLIPQ9H0E2 274 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 WRBO00258 174 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 NDUFS6O75380 124 aaKnown RBP16.31■□□□□ 0.2
SCARF1-206ENST00000573852 PGLYRP1O75594 196 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-206ENST00000573852 CMTM1Q8IZ96 169 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 OR5D13Q8NGL4 314 aa16.31■□□□□ 0.2
SCARF1-206ENST00000573852 A0A096LPE4 126 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 A0A1W2PPZ6 126 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 H3BP45 60 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 NDUFA6P56556 154 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 C20orf204Q6ZNR8 217 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms