RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 RBMS3Q6XE24 437 aaKnown RBP12.89□□□□□ -0.35
CHD3-215ENST00000572750 RTN4RL2Q86UN3 420 aa12.89□□□□□ -0.35
CHD3-215ENST00000572750 OR51D1Q8NGF3 324 aa12.89□□□□□ -0.35
CHD3-215ENST00000572750 KCNG3Q8TAE7 436 aa12.89□□□□□ -0.35
CHD3-215ENST00000572750 CENPOQ9BU64 300 aa12.89□□□□□ -0.35
CHD3-215ENST00000572750 BARHL1Q9BZE3 327 aa12.89□□□□□ -0.35
CHD3-215ENST00000572750 GAL3ST2Q9H3Q3 398 aa12.89□□□□□ -0.35
CHD3-215ENST00000572750 SPACA1Q9HBV2 294 aa12.89□□□□□ -0.35
CHD3-215ENST00000572750 STEAP1Q9UHE8 339 aa12.89□□□□□ -0.35
CHD3-215ENST00000572750 TRRAPQ9Y4A5 3859 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 A0A0A6YYD4 124 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 A0A0A6YYJ9 748 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 A0A0B4J203 849 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 TMEM30CPA0ZSE6 113 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM172BPA6NC97 362 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A10PA6NDY2 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A18PA6NE21 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A16PA6NEW6 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A20PA6NIJ5 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A8PA6NJQ4 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A7PA6NKC0 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 IFITM5A6NNB3 132 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A22PA8MWA6 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A12PA8MX19 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A5PA8MXJ8 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A23PA8MXZ1 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 PDCD6O75340 191 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A15PP0C7V4 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A13PP0C7W8 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A14PP0C7W9 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM90A24PP0C7X0 464 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 OMGP23515 440 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 CDK2P24941 298 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 GDNFP39905 211 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 PSMD7P51665 324 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 PLA2G7Q13093 441 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 BAMBIQ13145 260 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 BAIAP2L2Q6UXY1 529 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 OR2W3Q7Z3T1 314 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 ZDHHC22Q8N966 263 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 MRGPRDQ8TDS7 321 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 C17orf50Q8WW18 174 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 CORO2AQ92828 525 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 FAM3DQ96BQ1 224 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 YIPF6Q96EC8 236 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 KCTD7Q96MP8 289 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 HEXA-AS1Q9H8Q6 139 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 OR6C3Q9NZP0 311 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 PEX16Q9Y5Y5 336 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
CHD3-215ENST00000572750 MCRIP1C9JLW8 97 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 AIPO00170 330 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
CHD3-215ENST00000572750 CFPP27918 469 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 SSTR5P35346 364 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 C17orf58Q2M2W7 97 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 SLC35E4Q6ICL7 350 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 ZNF497Q6ZNH5 498 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 ZDHHC16Q969W1 377 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 JMJD8Q96S16 334 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 TM2D1Q9BX74 207 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 LPAR5Q9H1C0 372 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 LIN7BQ9HAP6 207 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 ETAA1Q9NY74 926 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 TAS2R3Q9NYW6 316 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 CALYQ9NYX4 217 aa12.87□□□□□ -0.35
CHD3-215ENST00000572750 TMEM272A0A1B0GTI8 110 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 UBE2QL1A1L167 161 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 ZNF729A6NN14 1252 aaPredicted RBP12.86□□□□□ -0.35
CHD3-215ENST00000572750 HOXA3O43365 443 aaPredicted RBP12.86□□□□□ -0.35
CHD3-215ENST00000572750 ARG1P05089 322 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 SLC2A2P11168 524 aaPredicted RBP12.86□□□□□ -0.35
CHD3-215ENST00000572750 FUT3P21217 361 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 PAX6P26367 422 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 CHATP28329 748 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 SDC2P34741 201 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 TGFBR1P36897 503 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 UBA52P62987 128 aaKnown RBP12.86□□□□□ -0.35
CHD3-215ENST00000572750 MXD1Q05195 221 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 C6orf201Q7Z4U5 140 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 OR13D1Q8NGV5 346 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 CCDC107Q8WV48 283 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 SULT4A1Q9BR01 284 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 TMEM133Q9H2Q1 129 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 TNFRSF19Q9NS68 423 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 FAM96BQ9Y3D0 163 aa12.86□□□□□ -0.35
CHD3-215ENST00000572750 IGHV2-26A0A0B4J1V2 119 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 KBTBD11-OT1A0A1B0GTJ5 212 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 ODF3BA8MYP8 253 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 LDLRAD4O15165 306 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 AIREO43918 545 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 PAHP00439 452 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 IL1AP01583 271 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 MELTFP08582 738 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 FBP1P09467 338 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 CLEC2LP0C7M8 214 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 EFNB2P52799 333 aa12.85□□□□□ -0.35
CHD3-215ENST00000572750 DYNC1I2Q13409 638 aaKnown RBP12.85□□□□□ -0.35
CHD3-215ENST00000572750 RBM39Q14498 530 aaKnown RBP12.85□□□□□ -0.35
CHD3-215ENST00000572750 LTC4SQ16873 150 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms