RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 C17orf98A8MV24 154 aa18.1■□□□□ 0.49
RAB40B-207ENST00000572603 NOL3O60936 208 aaKnown RBP18.1■□□□□ 0.49
RAB40B-207ENST00000572603 DLX1P56177 255 aa18.1■□□□□ 0.49
RAB40B-207ENST00000572603 METTL11BQ5VVY1 283 aa18.1■□□□□ 0.49
RAB40B-207ENST00000572603 OR13A1Q8NGR1 328 aa18.1■□□□□ 0.49
RAB40B-207ENST00000572603 DYNC2LI1Q8TCX1 351 aa18.1■□□□□ 0.49
RAB40B-207ENST00000572603 PCGF1Q9BSM1 259 aa18.1■□□□□ 0.49
RAB40B-207ENST00000572603 FAAP24Q9BTP7 215 aa18.1■□□□□ 0.49
RAB40B-207ENST00000572603 PECRQ9BY49 303 aa18.1■□□□□ 0.49
RAB40B-207ENST00000572603 UBE2J1Q9Y385 318 aaPredicted RBP18.1■□□□□ 0.49
RAB40B-207ENST00000572603 MEIKINA0A087WXM9 373 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 TOX4O94842 621 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 MT-ND4P03905 459 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 ZNF728P0DKX0 622 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 CGB3P0DN86 165 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 CGB7P0DN87 165 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 RORCP51449 518 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 ERVFRD-1P60508 538 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 Q6ZPA2 131 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 C1orf122Q6ZSJ8 110 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 VMO1Q7Z5L0 202 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 OR10R2Q8NGX6 335 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 TNFRSF14Q92956 283 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 ZNF714Q96N38 554 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 ATG5Q9H1Y0 275 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 UNKLQ9H9P5 680 aaKnown RBP18.09■□□□□ 0.49
RAB40B-207ENST00000572603 SIRT7Q9NRC8 400 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 KCNK7Q9Y2U2 307 aa18.09■□□□□ 0.49
RAB40B-207ENST00000572603 TRGV10A0A0A0MS01 117 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 TRAV39A0A0B4J263 110 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 MFNGO00587 321 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 CA11O75493 328 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 GLP1RP43220 463 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 DYNC1I2Q13409 638 aaKnown RBP18.08■□□□□ 0.48
RAB40B-207ENST00000572603 FAM189A2Q15884 450 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 C17orf58Q2M2W7 97 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 OLFML2AQ68BL7 652 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 CMTM4Q8IZR5 234 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 MRPL30Q8TCC3 161 aaKnown RBP18.08■□□□□ 0.48
RAB40B-207ENST00000572603 PLEKHJ1Q9NW61 149 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 TAS2R3Q9NYW6 316 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 OR6C3Q9NZP0 311 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 AK3Q9UIJ7 227 aa18.08■□□□□ 0.48
RAB40B-207ENST00000572603 TRAV40A0A0B4J280 105 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 A0A1W2PPH5 198 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 METTL21EPA6NDL7 271 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 RBP4P02753 201 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 IGHV4-38-2P0DP08 117 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 HOXB4P17483 251 aaPredicted RBP18.07■□□□□ 0.48
RAB40B-207ENST00000572603 PRTN3P24158 256 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 PRB3Q04118 309 aaPredicted RBP18.07■□□□□ 0.48
RAB40B-207ENST00000572603 HCP5Q6MZN7 132 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 Q6ZTK2 550 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 TRAPPC6BQ86SZ2 158 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 RAB3CQ96E17 227 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 METTL8Q9H825 291 aaKnown RBP18.07■□□□□ 0.48
RAB40B-207ENST00000572603 CCDC59Q9P031 241 aaKnown RBP18.07■□□□□ 0.48
RAB40B-207ENST00000572603 RSL24D1Q9UHA3 163 aaKnown RBP18.07■□□□□ 0.48
RAB40B-207ENST00000572603 CDC42EP3Q9UKI2 254 aa18.07■□□□□ 0.48
RAB40B-207ENST00000572603 NIPBLQ6KC79 2804 aaeCLIP18.07■□□□□ 0.48
RAB40B-207ENST00000572603 ZNF701M0R085 212 aaPredicted RBP18.06■□□□□ 0.48
RAB40B-207ENST00000572603 MMP23AO75900 390 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 CLPXO76031 633 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 NAPSAO96009 420 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 HIST1H1DP16402 221 aaKnown RBP18.06■□□□□ 0.48
RAB40B-207ENST00000572603 ZNF182P17025 639 aaPredicted RBP18.06■□□□□ 0.48
RAB40B-207ENST00000572603 HNF1AP20823 631 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 GDNFP39905 211 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 KLRD1Q13241 179 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 OR4K15Q8NH41 348 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 MRGPRDQ8TDS7 321 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 HDHD3Q9BSH5 251 aaPredicted RBP18.06■□□□□ 0.48
RAB40B-207ENST00000572603 ABCG5Q9H222 651 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 SETD2Q9BYW2 2564 aaPredicted RBP18.06■□□□□ 0.48
RAB40B-207ENST00000572603 NF1P21359 2839 aa18.06■□□□□ 0.48
RAB40B-207ENST00000572603 SMIM31A0A1B0GVY4 71 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 DPPA5A6NC42 116 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 CCDC160A6NGH7 325 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 ZNF729A6NN14 1252 aaPredicted RBP18.05■□□□□ 0.48
RAB40B-207ENST00000572603 RNASEK-C17orf49H0YIS7 233 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 CRLF1O75462 422 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 SSTR5P35346 364 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 UBE2NLQ5JXB2 153 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 FOXB2Q5VYV0 432 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 SAMD12Q8N8I0 201 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 CCDC107Q8WV48 283 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 ACOT12Q8WYK0 555 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 GAL3ST2Q9H3Q3 398 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 LINC00574Q9H8X3 128 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.05■□□□□ 0.48
RAB40B-207ENST00000572603 MBNL3Q9NUK0 354 aaKnown RBP18.05■□□□□ 0.48
RAB40B-207ENST00000572603 CALYQ9NYX4 217 aa18.05■□□□□ 0.48
RAB40B-207ENST00000572603 CENPVL3A0A0U1RRI6 287 aa18.04■□□□□ 0.48
RAB40B-207ENST00000572603 C15orf65H3BRN8 121 aa18.04■□□□□ 0.48
RAB40B-207ENST00000572603 IGHV1-8P0DP01 117 aa18.04■□□□□ 0.48
RAB40B-207ENST00000572603 GNB3P16520 340 aa18.04■□□□□ 0.48
RAB40B-207ENST00000572603 PRAMEF5Q5TYX0 476 aa18.04■□□□□ 0.48
RAB40B-207ENST00000572603 ZNF880Q6PDB4 577 aa18.04■□□□□ 0.48
RAB40B-207ENST00000572603 ZNF782Q6ZMW2 699 aaPredicted RBP18.04■□□□□ 0.48
RAB40B-207ENST00000572603 NANPQ8TBE9 248 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms