RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 AIPO00170 330 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 TOX4O94842 621 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 CCL3L1P16619 93 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 LMO1P25800 156 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 RPS19P39019 145 aaKnown RBP10.9□□□□□ -0.66
CCDC40-205ENST00000571028 P2RX3P56373 397 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 ERVFRD-1P60508 538 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 RPS27AP62979 156 aaKnown RBP10.9□□□□□ -0.66
CCDC40-205ENST00000571028 QRFPP83859 136 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 PAX8Q06710 450 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 ZNF273Q14593 569 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 MPV17LQ2QL34 196 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 NHLRC3Q5JS37 347 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 RAB12Q6IQ22 244 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 SFXN4Q6P4A7 337 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 SLC16A12Q6ZSM3 486 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 ANKRD13BQ86YJ7 626 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 LY6G5BQ8NDX9 201 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 PLPPR1Q8TBJ4 325 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 DYRK2Q92630 601 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 Q96M66 194 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 URM1Q9BTM9 101 aaKnown RBP10.9□□□□□ -0.66
CCDC40-205ENST00000571028 SIRT7Q9NRC8 400 aa10.9□□□□□ -0.66
CCDC40-205ENST00000571028 MEIKINA0A087WXM9 373 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 TRBV23-1A0A0A0MS06 115 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 A0A1W2PRD5 423 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 A0A1W2PRF3 423 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 A0A1W2PRM7 423 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 hADV38S2A0JD32 116 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 CLPSL1A2RUU4 121 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 PAHP00439 452 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 BLVRBP30043 206 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-205ENST00000571028 VEGFCP49767 419 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 EFNB2P52799 333 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 BLMHQ13867 455 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 OR2W3Q7Z3T1 314 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 LINC00596Q86U02 117 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 CMTM4Q8IZR5 234 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 FAM110DQ8TAY7 271 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-205ENST00000571028 DACT3Q96B18 629 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-205ENST00000571028 COQ2Q96H96 371 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 WDFY2Q96P53 400 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 BARHL1Q9BZE3 327 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 ETAA1Q9NY74 926 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 KIF25Q9UIL4 384 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 RAB22AQ9UL26 194 aa10.89□□□□□ -0.67
CCDC40-205ENST00000571028 A0A0A6YYD4 124 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 TRAV40A0A0B4J280 105 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 A0A1W2PPH5 198 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 FUOMA2VDF0 154 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 CCDC160A6NGH7 325 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 SOCS1O15524 211 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 PDCD6O75340 191 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 GABARAPO95166 117 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 IGHV4-38-2P0DP08 117 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 FUT3P21217 361 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 GLP1RP43220 463 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 RANBP1P43487 201 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 SIGIRRQ6IA17 410 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 ZNF782Q6ZMW2 699 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-205ENST00000571028 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 C6orf201Q7Z4U5 140 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 VMO1Q7Z5L0 202 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 RTN4RL2Q86UN3 420 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 C8orf46Q8TAG6 207 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 NDNFQ8TB73 568 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 LGALS14Q8TCE9 139 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 CCDC107Q8WV48 283 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 LHX4Q969G2 390 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 FAAP24Q9BTP7 215 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 SIRPDQ9H106 197 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 LPAR5Q9H1C0 372 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 ATG5Q9H1Y0 275 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 SPACA1Q9HBV2 294 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 CMYA5Q8N3K9 4069 aa10.88□□□□□ -0.67
CCDC40-205ENST00000571028 A0A075B6Q4 140 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 TRGV10A0A0A0MS01 117 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 MDFIC2A0A1B0GVS7 189 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 ODAMA1E959 279 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 NOL3O60936 208 aaKnown RBP10.87□□□□□ -0.67
CCDC40-205ENST00000571028 NDUFA7O95182 113 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 IL1AP01583 271 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 KLRD1Q13241 179 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 RBM39Q14498 530 aaKnown RBP10.87□□□□□ -0.67
CCDC40-205ENST00000571028 CTF1Q16619 201 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 LTC4SQ16873 150 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 C2orf68Q2NKX9 166 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 C11orf91Q3C1V1 193 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 OR5H6Q8NGV6 325 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 OR4K15Q8NH41 348 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 TBX15Q96SF7 602 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 TM2D1Q9BX74 207 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 IFT22Q9H7X7 185 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 PLEKHJ1Q9NW61 149 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 C1RLQ9NZP8 487 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 RNF114Q9Y508 228 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 KPTNQ9Y664 436 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 WNK2Q9Y3S1 2297 aa10.87□□□□□ -0.67
CCDC40-205ENST00000571028 TMEM30CPA0ZSE6 113 aa10.86□□□□□ -0.67
CCDC40-205ENST00000571028 FAM90A10PA6NDY2 464 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms