RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 MBD3L1Q8WWY6 194 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 LAMP3Q9UQV4 416 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 WDFY4Q6ZS81 3184 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 LOC102725191A0A1B0GVB3 256 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 AQP7P3A6NL99 342 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 ZNF814B7Z6K7 855 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 OR2J2O76002 312 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 TCN2P20062 427 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 CCR5P51681 352 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 CLDN17P56750 224 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 MRPS21P82921 87 aaKnown RBP13.3□□□□□ -0.28
SMG6-207ENST00000570756 ENDOGQ14249 297 aaKnown RBP13.3□□□□□ -0.28
SMG6-207ENST00000570756 ACSF3Q4G176 576 aaPredicted RBP13.3□□□□□ -0.28
SMG6-207ENST00000570756 KIAA0895LQ68EN5 471 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 ZNF66Q6ZN08 573 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 THAP3Q8WTV1 239 aaPredicted RBP13.3□□□□□ -0.28
SMG6-207ENST00000570756 KLHDC7BQ96G42 594 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 ST3GAL6Q9Y274 331 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 RALGAPA1Q6GYQ0 2036 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 WDR87Q6ZQQ6 2873 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 PFN1P07737 140 aaKnown RBP13.3□□□□□ -0.28
SMG6-207ENST00000570756 NPBWR2P48146 333 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 SHBQ15464 509 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 ADIRFQ15847 76 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 CDCP2Q5VXM1 449 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 LCN15Q6UWW0 184 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 SMRP1Q8NCR6 262 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 AGMATQ9BSE5 352 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 RPRMQ9NS64 109 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 PLEK2Q9NYT0 353 aa13.3□□□□□ -0.28
SMG6-207ENST00000570756 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 CEBPZOSA8MTT3 80 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 TUBG1P23258 451 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 IDH3GP51553 393 aaPredicted RBP13.29□□□□□ -0.28
SMG6-207ENST00000570756 HIST1H3AP68431 136 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 PAX5Q02548 391 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 RAB35Q15286 201 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 RSPO1Q2MKA7 263 aaPredicted RBP13.29□□□□□ -0.28
SMG6-207ENST00000570756 C10orf128Q5T292 105 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 C16orf82Q7Z2V1 217 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 C17orf78Q8N4C9 275 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 TMEM170AQ8WVE7 144 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 R3HDM4Q96D70 268 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 SNHG12Q9BXW3 62 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 ZNF442Q9H7R0 627 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 IL36GQ9NZH8 169 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 IGKV1-27A0A075B6S5 117 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 PIGBOS1A0A0B4J2F0 54 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 IGHV3-20A0A0C4DH32 117 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 GABRG2P18507 467 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 UCP1P25874 307 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 G0S2P27469 103 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 MRPS34P82930 218 aaKnown RBP13.29□□□□□ -0.28
SMG6-207ENST00000570756 ACOT6Q3I5F7 207 aaPredicted RBP13.29□□□□□ -0.28
SMG6-207ENST00000570756 SNAI3Q3KNW1 292 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 WDR25Q64LD2 544 aaPredicted RBP13.29□□□□□ -0.28
SMG6-207ENST00000570756 CYP2G1PQ6ZSU1 146 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 OR1L3Q8NH93 324 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 IL22RA2Q969J5 263 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 SMIM7Q9BQ49 75 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 ATG101Q9BSB4 218 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 PSMG3Q9BT73 122 aaPredicted RBP13.29□□□□□ -0.28
SMG6-207ENST00000570756 SLC7A10Q9NS82 523 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 RNF115Q9Y4L5 304 aa13.29□□□□□ -0.28
SMG6-207ENST00000570756 A0A1B0GX78 115 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 H7BYZ3 331 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 METTL15P1P0C7V9 234 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 JMJD7P0C870 316 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 GALR1P47211 349 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 ERVFC1-1P60608 527 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 PMS2P11Q13670 270 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 P2RY6Q15077 328 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 TMEM241Q24JQ0 296 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 NKAIN1Q4KMZ8 207 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 MRPL41Q8IXM3 137 aaKnown RBP13.28□□□□□ -0.28
SMG6-207ENST00000570756 PLPPR1Q8TBJ4 325 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 UBE2ZQ9H832 354 aaPredicted RBP13.28□□□□□ -0.28
SMG6-207ENST00000570756 Q9N2K0 584 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 PRSS50Q9UI38 385 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 BDP1A6H8Y1 2624 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 IGLV3-32A0A0A0MS00 114 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 C10orf142B7Z368 130 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 HLA-HP01893 362 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 FKBP2P26885 142 aaKnown RBP13.28□□□□□ -0.28
SMG6-207ENST00000570756 FOXL2NBQ6ZUU3 175 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 GPR137CQ8N3F9 429 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 OR51G1Q8NGK1 321 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 RNF138Q8WVD3 245 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 RAB40CQ96S21 281 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 METTL7AQ9H8H3 244 aa13.28□□□□□ -0.28
SMG6-207ENST00000570756 SLC33A1O00400 549 aaPredicted RBP13.27□□□□□ -0.29
SMG6-207ENST00000570756 NUBP1P53384 320 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 PAX9P55771 341 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 SERF2P84101 59 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 OR5D13Q8NGL4 314 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 CD207Q9UJ71 328 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 VPS13AQ96RL7 3174 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 NXPH3O95157 252 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 CD55P08174 381 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 DRD1P21728 446 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms