RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 CXorf67Q86X51 503 aaPredicted RBP13.21□□□□□ -0.3
USP43-202ENST00000570475 RPUSD4Q96CM3 377 aaKnown RBP13.21□□□□□ -0.3
USP43-202ENST00000570475 ZNF251Q9BRH9 671 aa13.21□□□□□ -0.3
USP43-202ENST00000570475 WNT5BQ9H1J7 359 aa13.21□□□□□ -0.3
USP43-202ENST00000570475 TMEM131Q92545 1883 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 IGHV1-45A0A0A0MS14 117 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 CLDN1O95832 211 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 DTYMKP23919 212 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 RAB5CP51148 216 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 TLE4Q04727 773 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 TUSC5Q8IXB3 177 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 MSI2Q96DH6 328 aaKnown RBP13.2□□□□□ -0.3
USP43-202ENST00000570475 HES7Q9BYE0 225 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 GPR35Q9HC97 309 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 CADP27708 2225 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 SYNGR3O43761 229 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 GRPP07492 148 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 CA6P23280 308 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 FKBP2P26885 142 aaKnown RBP13.2□□□□□ -0.3
USP43-202ENST00000570475 RAB1AP62820 205 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 USF2Q15853 346 aaPredicted RBP13.2□□□□□ -0.3
USP43-202ENST00000570475 ZNF880Q6PDB4 577 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 HLA-CQ95604 372 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 MOB3AQ96BX8 217 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 BOD1Q96IK1 185 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 TMPRSS5Q9H3S3 457 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 CACNG5Q9UF02 275 aa13.2□□□□□ -0.3
USP43-202ENST00000570475 PQLC2LA1A4F0 135 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 ANKRD30BLA7E2S9 258 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 TRDCB7Z8K6 153 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 UMODP07911 640 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 CD63P08962 238 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 FABP4P15090 132 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 IL15RAQ13261 267 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 SLC25A53Q5H9E4 307 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 LFNGQ8NES3 379 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 RHBDD1Q8TEB9 315 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 RBMXL1Q96E39 390 aaKnown RBP13.19□□□□□ -0.3
USP43-202ENST00000570475 GAB2Q9UQC2 676 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 A0A0U1RQK1 487 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 PPP1R2P9O14990 202 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 SCAF4O95104 1147 aaKnown RBP13.19□□□□□ -0.3
USP43-202ENST00000570475 TRGC2P03986 189 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 PSG2P11465 335 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 SELEP16581 610 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 RPS23P62266 143 aaKnown RBP13.19□□□□□ -0.3
USP43-202ENST00000570475 PMP22Q01453 160 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 KCNMB1Q16558 191 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 C10orf128Q5T292 105 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 FADS6Q8N9I5 356 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 TMEM54Q969K7 222 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 TCEAL7Q9BRU2 100 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 ZNF665Q9H7R5 613 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 ZDHHC8Q9ULC8 765 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 CEACAM18A8MTB9 384 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 COX6A1P12074 109 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 HIST3H3Q16695 136 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 ZNF787Q6DD87 383 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 ZDHHC23Q8IYP9 409 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 CPEB3Q8NE35 698 aaKnown RBP13.19□□□□□ -0.3
USP43-202ENST00000570475 DMBX1Q8NFW5 382 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 SDSLQ96GA7 329 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 FAM234AQ9H0X4 552 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 HSF4Q9ULV5 492 aa13.19□□□□□ -0.3
USP43-202ENST00000570475 CELA3AP09093 270 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 ABHD17BQ5VST6 288 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 TMEM171Q8WVE6 324 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 ANGPTL4Q9BY76 406 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 TMEM222Q9H0R3 208 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 ZNF705GA8MUZ8 300 aaPredicted RBP13.18□□□□□ -0.3
USP43-202ENST00000570475 H3F3AP84243 136 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 SMCO3A2RU48 225 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 DEGS1O15121 323 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 KRASP01116 189 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 SMIM6P0DI80 62 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 LYL1P12980 280 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 SRPXP78539 464 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 RNF212Q495C1 297 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 C10orf91Q5T1B1 145 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 DNASE2BQ8WZ79 361 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 GPR61Q9BZJ8 451 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 GLRX2Q9NS18 164 aa13.18□□□□□ -0.3
USP43-202ENST00000570475 AURKAIP1Q9NWT8 199 aaPredicted RBP13.18□□□□□ -0.3
USP43-202ENST00000570475 C5orf52A6NGY3 159 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 CST2P09228 141 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 MLF1P58340 268 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 OR2Y1Q8NGV0 311 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 GINS3Q9BRX5 216 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 GAR1Q9NY12 217 aaKnown RBP13.17□□□□□ -0.3
USP43-202ENST00000570475 NUP210LQ5VU65 1888 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 IGHV3-13P01766 116 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 IGHV3-7P01780 117 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 IDH3GP51553 393 aaPredicted RBP13.17□□□□□ -0.3
USP43-202ENST00000570475 COMMD1Q8N668 190 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 PSENENQ9NZ42 101 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 DOK5Q9P104 306 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 UBE2L5PA0A1B0GUS4 154 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 ARGFXA6NJG6 315 aa13.17□□□□□ -0.3
USP43-202ENST00000570475 PROB1E7EW31 1015 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms