RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CNIH3Q8TBE1 160 aa6.8□□□□□ -1.32
CTDNEP1-203ENST00000570385 TNFAIP8L1Q8WVP5 186 aa6.8□□□□□ -1.32
CTDNEP1-203ENST00000570385 TRUB1Q8WWH5 349 aaKnown RBP6.8□□□□□ -1.32
CTDNEP1-203ENST00000570385 TFAP2CQ92754 450 aa6.8□□□□□ -1.32
CTDNEP1-203ENST00000570385 GPER1Q99527 375 aa6.8□□□□□ -1.32
CTDNEP1-203ENST00000570385 BARHL1Q9BZE3 327 aa6.8□□□□□ -1.32
CTDNEP1-203ENST00000570385 DHDHQ9UQ10 334 aa6.8□□□□□ -1.32
CTDNEP1-203ENST00000570385 AMMECR1Q9Y4X0 333 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-203ENST00000570385 TENM3Q9P273 2699 aa6.8□□□□□ -1.32
CTDNEP1-203ENST00000570385 NCBP2LA6PVI3 153 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 E9PQ18 207 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 GABRPO00591 440 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 CIB2O75838 187 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 CDRT1O95170 752 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 IL1AP01583 271 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 ALPLP05186 524 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 DBTP11182 482 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 C21orf33P30042 268 aaPredicted RBP6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 GTF2A1P52655 376 aaPredicted RBP6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 SNRPGP62308 76 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 GALEQ14376 348 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 RSU1Q15404 277 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 RSBN1Q5VWQ0 802 aaPredicted RBP6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 SLC35E3Q7Z769 313 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 OR5AK2Q8NH90 309 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 CHPT1Q8WUD6 406 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 CCDC107Q8WV48 283 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 RHOFQ9HBH0 211 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 TAS2R4Q9NYW5 299 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 EXOGQ9Y2C4 368 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 ORC6Q9Y5N6 252 aa6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 KMT2CQ8NEZ4 4911 aaKnown RBP6.79□□□□□ -1.32
CTDNEP1-203ENST00000570385 IGHV3-43A0A0B4J1X8 118 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 NPIPB11E5RHQ5 1161 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 CCRL2O00421 344 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 HSD17B6O14756 317 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 OR7C1O76099 320 aaPredicted RBP6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 RPLP1P05386 114 aaKnown RBP6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 RPSAP08865 295 aaKnown RBP6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 IGHV3-43DP0DP04 118 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 RAB3AP20336 220 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 MYCNOSP40205 109 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 RASSF2P50749 326 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 RAB7AP51149 207 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 LUMP51884 338 aaPredicted RBP6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 SLC35B1P78383 322 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 SLC25A30Q5SVS4 291 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 MEDAGQ5VYS4 303 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 ELP2Q6IA86 826 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 UNQ9370/PRO34162Q6UXP9 181 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 ZNF695Q8IW36 515 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 STPG2Q8N412 459 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 CBR4Q8N4T8 237 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 PARP16Q8N5Y8 322 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 SUMF2Q8NBJ7 301 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 HAVCR2Q8TDQ0 301 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 RGP1Q92546 391 aaPredicted RBP6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 ORAI1Q96D31 301 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 MRPL48Q96GC5 212 aaKnown RBP6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 RAX2Q96IS3 184 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 EAF1Q96JC9 268 aaPredicted RBP6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 P2RX4Q99571 388 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 B9D2Q9BPU9 175 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 DPCDQ9BVM2 203 aaPredicted RBP6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 PCDHB16Q9NRJ7 776 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 ERVK13-1Q9NX77 482 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 ING4Q9UNL4 249 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 GMPPBQ9Y5P6 360 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 COL7A1Q02388 2944 aa6.78□□□□□ -1.32
CTDNEP1-203ENST00000570385 SORL1Q92673 2214 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 IGHV1-3A0A0C4DH29 117 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 A0A1W2PP11 408 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 TMEM212A6NML5 194 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 SNTNA6NMZ2 147 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF736B4DX44 427 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 H3BNX3 289 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 CCL24O00175 119 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 SDCBPO00560 298 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 GEMIN2O14893 280 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 SLC31A2O15432 143 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 MAGEB3O15480 346 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 FGF16O43320 207 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 FADS2O95864 444 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 IGHG2P01859 326 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 GAPDHP04406 335 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 GABRB1P18505 474 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 GBX2P52951 348 aaPredicted RBP6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 DGCR2P98153 550 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 IL13RA2Q14627 380 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 ATAD3CQ5T2N8 411 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 XAF1Q6GPH4 301 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 FOXRED2Q8IWF2 684 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR8H3Q8N146 312 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 SYS1Q8N2H4 156 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 PXT1Q8NFP0 134 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR52I1Q8NGK6 324 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 NEK7Q8TDX7 302 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 ARL11Q969Q4 196 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 WWC2-AS2Q96NR7 200 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms