RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 MCFD2Q8NI22 146 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 CNIH3Q8TBE1 160 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 FGGYQ96C11 551 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 ADTRPQ96IZ2 230 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 IMMP1LQ96LU5 166 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 LSM4Q9Y4Z0 139 aaKnown RBP5.74□□□□□ -1.49
SMG1-217ENST00000569764 TMEM213A2RRL7 107 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 MBD3L5A6NJ08 208 aaPredicted RBP5.74□□□□□ -1.49
SMG1-217ENST00000569764 MPTX1A8MV57 137 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 PHOX2AO14813 284 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 ZNF207O43670 478 aaKnown RBP5.74□□□□□ -1.49
SMG1-217ENST00000569764 HLA-HP01893 362 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 HIST1H1EP10412 219 aaKnown RBP5.74□□□□□ -1.49
SMG1-217ENST00000569764 HIST1H1BP16401 226 aaKnown RBP5.74□□□□□ -1.49
SMG1-217ENST00000569764 GPR6P46095 362 aaPredicted RBP5.74□□□□□ -1.49
SMG1-217ENST00000569764 ROM1Q03395 351 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 ODF4Q2M2E3 257 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 TIMM23BQ5SRD1 257 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 HMGN2P46Q86SG4 172 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 ARIH2OSQ8N7S6 290 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 SDHCQ99643 169 aaPredicted RBP5.74□□□□□ -1.49
SMG1-217ENST00000569764 OR5V1Q9UGF6 321 aa5.74□□□□□ -1.49
SMG1-217ENST00000569764 MEIKINA0A087WXM9 373 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 FAM90A10PA6NDY2 464 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 TRDCB7Z8K6 153 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 M0R1B8 84 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 CXCL13O43927 109 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 HPRP00739 348 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 OPN1SWP03999 348 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 PYCR1P32322 319 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 MICAQ29983 383 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 TP53I3Q53FA7 332 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 TMEM268Q5VZI3 342 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 FAM166AQ6J272 317 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 PAMR1Q6UXH9 720 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 SHFQ7M4L6 423 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 LYG1Q8N1E2 194 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 OR6N2Q8NGY6 317 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 TM4SF18Q96CE8 201 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 OR2M2Q96R28 347 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 SNHG12Q9BXW3 62 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 FNDC4Q9H6D8 234 aaPredicted RBP5.73□□□□□ -1.49
SMG1-217ENST00000569764 CXorf36Q9H7Y0 433 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 GAR1Q9NY12 217 aaKnown RBP5.73□□□□□ -1.49
SMG1-217ENST00000569764 COMMD3Q9UBI1 195 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 NBASA2RRP1 2371 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 TNFSF11O14788 317 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 MPDU1O75352 247 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 SCGNO76038 276 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 UBL3O95164 117 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 FASP25445 335 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 SLC6A1P30531 599 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 C16orf47Q6ZP98 133 aaPredicted RBP5.73□□□□□ -1.49
SMG1-217ENST00000569764 GHSRQ92847 366 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 GRAMD2BQ96HH9 432 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 PMP2P02689 132 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 RFX2P48378 723 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 TAS2R43P59537 309 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 PIGFQ07326 219 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 GAGE5Q13069 117 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 GAGE6Q13070 117 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 RGNQ15493 299 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 NNATQ16517 81 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 FAAP20Q6NZ36 180 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 PRR22Q8IZ63 422 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 SVBPQ8N300 66 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 JAGN1Q8N5M9 183 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 C3orf56Q8N813 242 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.73□□□□□ -1.49
SMG1-217ENST00000569764 SPRYD4Q8WW59 207 aaPredicted RBP5.73□□□□□ -1.49
SMG1-217ENST00000569764 FAM168AQ92567 244 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 C11orf54Q9H0W9 315 aaPredicted RBP5.73□□□□□ -1.49
SMG1-217ENST00000569764 TIMM10BQ9Y5J6 103 aa5.73□□□□□ -1.49
SMG1-217ENST00000569764 ARID1BQ8NFD5 2236 aaPredicted RBP5.72□□□□□ -1.49
SMG1-217ENST00000569764 SERINC4A6NH21 518 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 A8MVM7 634 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 FOXH1O75593 365 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 IGHG1P01857 330 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 OR1E2P47887 323 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 LINC00303Q3SY05 128 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 ZNF404Q494X3 552 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 ACTL10Q5JWF8 245 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 ZNF611Q8N823 705 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 DOK4Q8TEW6 326 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 SPTSSAQ969W0 71 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 C18orf12Q96KH6 178 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 POLR2J2Q9GZM3 115 aaKnown RBP5.72□□□□□ -1.49
SMG1-217ENST00000569764 POLR2J3Q9H1A7 115 aaKnown RBP5.72□□□□□ -1.49
SMG1-217ENST00000569764 RERGLQ9H628 205 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 METTL1Q9UBP6 276 aaKnown RBP5.72□□□□□ -1.49
SMG1-217ENST00000569764 DIDO1Q9BTC0 2240 aaKnown RBP5.72□□□□□ -1.49
SMG1-217ENST00000569764 LY6G6EA0A0G2JKS1 128 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 A0A1W2PR80 420 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 M0R233 179 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 DHHO43323 396 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 NTN1O95631 604 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 UBE2V1Q13404 147 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 TAL2Q16559 108 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 LGALS12Q96DT0 336 aa5.72□□□□□ -1.49
SMG1-217ENST00000569764 ZFP30Q9Y2G7 519 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms