RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 MYOZ1Q9NP98 299 aaPredicted RBP9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 MGAT4CQ9UBM8 478 aa9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 TRBV6-6A0A0A6YYG2 114 aa9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 MEX3AA1L020 520 aaKnown RBP9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 TNFSF4P23510 183 aa9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 FXYD4P59646 89 aa9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 DHRS11Q6UWP2 260 aa9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 TCTE3Q8IZS6 198 aa9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 TOMM40LQ969M1 308 aa9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 COQ2Q96H96 371 aa9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 CISD1Q9NZ45 108 aaKnown RBP9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 DNAJB11Q9UBS4 358 aa9.17□□□□□ -0.94
PDXDC1-216ENST00000569715 ZNF462Q96JM2 2506 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 TRDCB7Z8K6 153 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 SIX6O95475 246 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 CLDN14O95500 239 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 SEC61A1P61619 476 aaKnown RBP9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 AESQ08117 197 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 ZFP69Q49AA0 526 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 SHEQ5VZ18 495 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 TPRX1Q8N7U7 411 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 ASCC1Q8N9N2 400 aaKnown RBP9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 PRR13Q9NZ81 148 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 USP9XQ93008 2570 aaPredicted RBP9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 ADH4P08319 380 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 PGAM2P15259 253 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 AADACP22760 399 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 VAMP1P23763 118 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 PRDX2P32119 198 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 MDH2P40926 338 aaKnown RBP9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 LIN54Q6MZP7 749 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 SLC7A5P1Q8MH63 180 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 GAPTQ8N292 157 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 SHARPINQ9H0F6 387 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 RIMS4Q9H426 269 aaPredicted RBP9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 GLS2Q9UI32 602 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 PPP1R3CQ9UQK1 317 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 MYO18BQ8IUG5 2567 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 MEIKINA0A087WXM9 373 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 A0A1B0GW55 424 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 C9orf170A2RU37 121 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 C19orf84I3L1E1 186 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 DUX4L2P0CJ85 424 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 DUX4L3P0CJ86 424 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 DUX4L4P0CJ87 422 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 DUX4L5P0CJ88 424 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 DUX4L6P0CJ89 424 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 DUX4L7P0CJ90 424 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 APOBEC3AP31941 199 aaPredicted RBP9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 GABRA2P47869 451 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 HLA-DRB3P79483 266 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 SRSF7Q16629 238 aaKnown RBP eCLIP9.16□□□□□ -0.947e-8■■■□□ 16.5
PDXDC1-216ENST00000569715 DUX4L9Q6RFH8 374 aaPredicted RBP9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 LYG2Q86SG7 212 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 PRR18Q8N4B5 295 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 CASTOR1Q8WTX7 329 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 CHIAQ9BZP6 476 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 RASL12Q9NYN1 266 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 RNF7Q9UBF6 113 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 DUX4Q9UBX2 424 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 KIF25Q9UIL4 384 aa9.16□□□□□ -0.94
PDXDC1-216ENST00000569715 ZNF737O75373 536 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 CD55P08174 381 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 SELLP14151 372 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 SUPT4H1P63272 117 aaKnown RBP9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 OR2AK2Q8NG84 335 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 KIRREL1Q96J84 757 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 DYNLRB1Q9NP97 96 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 DECR2Q9NUI1 292 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 TRAPPC2LQ9UL33 140 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 NPTNQ9Y639 398 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 KIR2DS1A0A191URI9 304 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 ANXA3P12429 323 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 KIR2DS4P43632 304 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 KIR2DS1Q14954 304 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 ZNF672Q499Z4 452 aaPredicted RBP9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 DCAF12L2Q5VW00 463 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 NLRC3Q7RTR2 1065 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 FAM90A1Q86YD7 464 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 DEFB108BQ8NET1 73 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 Q8TCH9 128 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 TMEM204Q9BSN7 226 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 ZNF436Q9C0F3 470 aaPredicted RBP9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 TANC2Q9HCD6 1990 aa9.15□□□□□ -0.94
PDXDC1-216ENST00000569715 IFNL4K9M1U5 179 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 GOSR2O14653 212 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 GLP1RP43220 463 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 H2BFSP57053 126 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 IL13RA1P78552 427 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 C12orf45Q8N5I9 185 aaPredicted RBP9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 ZNRF1Q8ND25 227 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 TMEM185AQ8NFB2 350 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 SAP30LQ9HAJ7 183 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 PIPOXQ9P0Z9 390 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 OR1A1Q9P1Q5 309 aa9.15□□□□□ -0.95
PDXDC1-216ENST00000569715 RPS2P15880 293 aaKnown RBP9.14□□□□□ -0.95
PDXDC1-216ENST00000569715 GLIPR1P48060 266 aa9.14□□□□□ -0.95
PDXDC1-216ENST00000569715 SLC9A3R2Q15599 337 aa9.14□□□□□ -0.95
PDXDC1-216ENST00000569715 EFNB3Q15768 340 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms