RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 WDR89Q96FK6 387 aaPredicted RBP18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 LRRC46Q96FV0 321 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 PHB2Q99623 299 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 GCM1Q9NP62 436 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 KCNJ16Q9NPI9 418 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 FAM172BPA6NC97 362 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 DBX1A6NMT0 343 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 E7EQL1 145 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 SFT2D2O95562 160 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 CD55P08174 381 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 CTXN2P0C2S0 81 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 ZNF728P0DKX0 622 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 HLA-GP17693 338 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 TNFSF4P23510 183 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 NFYAP23511 347 aaPredicted RBP18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 TFF3Q07654 80 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 CLEC18BQ6UXF7 455 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 CD177Q8N6Q3 437 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 OR4A4PQ8NGN8 299 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 ZFAND1Q8TCF1 268 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 Q8TCH9 128 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 CASTOR1Q8WTX7 329 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 CABLES2Q9BTV7 478 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 MBNL3Q9NUK0 354 aaKnown RBP18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 OPN4Q9UHM6 478 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 WIPI2Q9Y4P8 454 aa18.93■□□□□ 0.62
VCPKMT-205ENST00000569518 CACNA1DQ01668 2161 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 HIVEP3Q5T1R4 2406 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 RELNP78509 3460 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 TUSC2O75896 110 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 PPYP01298 95 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 TFF1P04155 84 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 TK1P04183 234 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 OR3A1P47881 315 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 Q5BKY6 102 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 OR5M8Q8NGP6 311 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 ASB13Q8WXK3 278 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 DIRC2Q96SL1 478 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 METRNQ9UJH8 293 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 ROS1P08922 2347 aa18.92■□□□□ 0.62
VCPKMT-205ENST00000569518 IGKV1D-17A0A075B6S4 117 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 C17orf100A8MU93 164 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 CD3EP07766 207 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 PSG2P11465 335 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 SERPINF1P36955 418 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 KCNJ3P48549 501 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 FXYD4P59646 89 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 COL10A1Q03692 680 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 LAMTOR1Q6IAA8 161 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 TOMM40LQ969M1 308 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 ERGIC1Q969X5 290 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 MGAT4AQ9UM21 535 aa18.91■□□□□ 0.62
VCPKMT-205ENST00000569518 BET1O15155 118 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 SIAH2O43255 324 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 DNASE1P24855 282 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 SEC61A1P61619 476 aaKnown RBP18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 LPCAT3Q6P1A2 487 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 C11orf88Q6PI97 169 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 NEUROG1Q92886 237 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 CLEC4MQ9H2X3 399 aaPredicted RBP18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 PCDHB10Q9UN67 800 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 TRBV6-7A0A0A0MS04 114 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 A0A0B4J2A0 478 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 TMEM30CPA0ZSE6 113 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 VSTM5A8MXK1 200 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 NPIPB11E5RHQ5 1161 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 ZNF737O75373 536 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 PRDX2P32119 198 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 HERV-K104P61576 105 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 PAX5Q02548 391 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 SRSF4Q08170 494 aaKnown RBP18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 SLC35E4Q6ICL7 350 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 LIN54Q6MZP7 749 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 OR5T2Q8NGG2 359 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 FAM222BQ8WU58 562 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 PIK3IP1Q96FE7 263 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 COQ2Q96H96 371 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 RSRP1Q9BUV0 290 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 SHARPINQ9H0F6 387 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 PLSCR3Q9NRY6 295 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 SHPKQ9UHJ6 478 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 BOLA1Q9Y3E2 137 aa18.9■□□□□ 0.62
VCPKMT-205ENST00000569518 HCFC1P51610 2035 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 TRAV39A0A0B4J263 110 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 CRYM-AS1A6NIL9 109 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 M0R233 179 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 SLC9A3R2Q15599 337 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 HMGN3Q15651 99 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 BEX5Q5H9J7 111 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 SLC38A6Q8IZM9 456 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 C9orf62Q8N4C0 152 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 RNF7Q9UBF6 113 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 TRAPPC2LQ9UL33 140 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 USP24Q9UPU5 2620 aa18.89■□□□□ 0.61
VCPKMT-205ENST00000569518 TLE1Q04724 770 aa18.88■□□□□ 0.61
VCPKMT-205ENST00000569518 ANKRD55Q3KP44 614 aa18.88■□□□□ 0.61
VCPKMT-205ENST00000569518 BOLLQ8N9W6 283 aaKnown RBP18.88■□□□□ 0.61
VCPKMT-205ENST00000569518 ZBTB8BQ8NAP8 495 aaPredicted RBP18.88■□□□□ 0.61
VCPKMT-205ENST00000569518 DNAJB11Q9UBS4 358 aa18.88■□□□□ 0.61
VCPKMT-205ENST00000569518 RNF115Q9Y4L5 304 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms