RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 PPOXP50336 477 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 MECP2P51608 486 aaKnown RBP6.42□□□□□ -1.38
CDH13-214ENST00000569455 CCL8P80075 99 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 SURF2Q15527 256 aaPredicted RBP6.42□□□□□ -1.38
CDH13-214ENST00000569455 OVCH2Q7RTZ1 564 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 AKAP14Q86UN6 197 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 LILRB1Q8NHL6 650 aaPredicted RBP6.42□□□□□ -1.38
CDH13-214ENST00000569455 TERB2Q8NHR7 220 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 MRPL30Q8TCC3 161 aaKnown RBP6.42□□□□□ -1.38
CDH13-214ENST00000569455 GIMAP1Q8WWP7 306 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 MED30Q96HR3 178 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 ALX4Q9H161 411 aaPredicted RBP6.42□□□□□ -1.38
CDH13-214ENST00000569455 TMEM165Q9HC07 324 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 KCNIP1Q9NZI2 227 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 MAP1AP78559 2803 aaPredicted RBP6.42□□□□□ -1.38
CDH13-214ENST00000569455 ROS1P08922 2347 aa6.42□□□□□ -1.38
CDH13-214ENST00000569455 CCDC168Q8NDH2 2452 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 IGKV1D-8A0A087WSZ0 117 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 A0A0B4J293 547 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 A6NNC1 897 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 SNRPGP15A8MWD9 76 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.41□□□□□ -1.38
CDH13-214ENST00000569455 SDCBPO00560 298 aaPredicted RBP6.41□□□□□ -1.38
CDH13-214ENST00000569455 FABP7O15540 132 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 CREBL2O60519 120 aaPredicted RBP6.41□□□□□ -1.38
CDH13-214ENST00000569455 TK1P04183 234 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 OR5H8P0DN80 308 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 PSG2P11465 335 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 FPR2P25090 351 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 CD80P33681 288 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 GABRA2P47869 451 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 CEBPDP49716 269 aaPredicted RBP6.41□□□□□ -1.38
CDH13-214ENST00000569455 TAS2R31P59538 309 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 RRAS2P62070 204 aaPredicted RBP6.41□□□□□ -1.38
CDH13-214ENST00000569455 HLA-DRB3P79483 266 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 COL10A1Q03692 680 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 CBX3Q13185 183 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 ATXN7L3Q14CW9 347 aaPredicted RBP6.41□□□□□ -1.38
CDH13-214ENST00000569455 CARTPTQ16568 116 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 SWI5Q1ZZU3 235 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 MST1LQ2TV78 715 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 SPRNQ5BIV9 151 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 SLC35E4Q6ICL7 350 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 GLDNQ6ZMI3 551 aaPredicted RBP6.41□□□□□ -1.38
CDH13-214ENST00000569455 ZNF497Q6ZNH5 498 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 ZNF554Q86TJ5 538 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 GAPTQ8N292 157 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 ASCC1Q8N9N2 400 aaKnown RBP6.41□□□□□ -1.38
CDH13-214ENST00000569455 OR4A4PQ8NGN8 299 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 OR13C8Q8NGS7 320 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 PLPPR1Q8TBJ4 325 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 CYYR1Q96J86 154 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 SNX22Q96L94 193 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 RAB1BQ9H0U4 201 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 MED28Q9H204 178 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 OR51J1Q9H342 316 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 MYOZ1Q9NP98 299 aaPredicted RBP6.41□□□□□ -1.38
CDH13-214ENST00000569455 CBLN4Q9NTU7 201 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 TRAPPC2LQ9UL33 140 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 FLVCR2Q9UPI3 526 aa6.41□□□□□ -1.38
CDH13-214ENST00000569455 IGKV1D-17A0A075B6S4 117 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 PPIAL4EA0A075B759 164 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 A0A0A6YYJ9 748 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 TRAV38-1A0A0B4J264 116 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 OOEPA6NGQ2 149 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 NKX6-3A6NJ46 265 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 CEACAM18A8MTB9 384 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 PPIAL4DF5H284 164 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 C3orf80F5H4A9 247 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 LGALS8O00214 317 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 MGST3O14880 152 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 SSNA1O43805 119 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 PSPNO60542 156 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 CCNKO75909 580 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 DIRAS3O95661 229 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 CYB5R3P00387 301 aaPredicted RBP6.4□□□□□ -1.38
CDH13-214ENST00000569455 HNRNPCP07910 306 aaKnown RBP eCLIP6.4□□□□□ -1.38
CDH13-214ENST00000569455 GSTT2P0CG29 244 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 PPIAL4FP0DN26 164 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 PGAM2P15259 253 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 HOXB4P17483 251 aaPredicted RBP6.4□□□□□ -1.38
CDH13-214ENST00000569455 ANXA7P20073 488 aaKnown RBP6.4□□□□□ -1.38
CDH13-214ENST00000569455 OR3A1P47881 315 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 UBE2MP61081 183 aaKnown RBP6.4□□□□□ -1.38
CDH13-214ENST00000569455 HERV-K104P61576 105 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 SEC61A1P61619 476 aaKnown RBP6.4□□□□□ -1.38
CDH13-214ENST00000569455 PAX5Q02548 391 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 KCNJ8Q15842 424 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 HFEQ30201 348 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 C4orf46Q504U0 113 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 C6orf183Q5T699 404 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 ATPAF1Q5TC12 328 aaPredicted RBP6.4□□□□□ -1.38
CDH13-214ENST00000569455 TEX36Q5VZQ5 186 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 CD276Q5ZPR3 534 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 FAHD2BQ6P2I3 314 aaPredicted RBP6.4□□□□□ -1.38
CDH13-214ENST00000569455 ZNF880Q6PDB4 577 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 C11orf88Q6PI97 169 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 TRAT1Q6PIZ9 186 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 DHRS11Q6UWP2 260 aa6.4□□□□□ -1.38
CDH13-214ENST00000569455 TMED4Q7Z7H5 227 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms