RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 NAA60Q9H7X0 242 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 HSD17B6O14756 317 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 RHBDL1O75783 438 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 MBPP02686 304 aaPredicted RBP7.53□□□□□ -1.2
LINC00558-201ENST00000569422 OMGP23515 440 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 PTAFRP25105 342 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 HES3Q5TGS1 186 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 FBXW12Q6X9E4 464 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 CBLN2Q8IUK8 224 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 SELENOHQ8IZQ5 122 aaKnown RBP7.53□□□□□ -1.2
LINC00558-201ENST00000569422 SLC30A7Q8NEW0 376 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 ZNF596Q8TC21 504 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 CD300LFQ8TDQ1 290 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 NTNG2Q96CW9 530 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 FGF23Q9GZV9 251 aaPredicted RBP7.53□□□□□ -1.2
LINC00558-201ENST00000569422 MAGT1Q9H0U3 335 aa7.53□□□□□ -1.2
LINC00558-201ENST00000569422 FAM212BQ9NTI7 297 aaPredicted RBP7.53□□□□□ -1.2
LINC00558-201ENST00000569422 PCSK5Q92824 1860 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 SPENQ96T58 3664 aaKnown RBP7.52□□□□□ -1.21
LINC00558-201ENST00000569422 TRBV6-7A0A0A0MS04 114 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM218A2RU14 115 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 ADAM20O43506 726 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 CD59P13987 128 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 HNF1AP20823 631 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 LPAR6P43657 344 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 PLP2Q04941 152 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 SURF2Q15527 256 aaPredicted RBP7.52□□□□□ -1.21
LINC00558-201ENST00000569422 OR8B8Q15620 311 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM268Q5VZI3 342 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM42Q69YG0 159 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 OR2T2Q6IF00 324 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 TFAP2EQ6VUC0 442 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 GCNT2Q8N0V5 402 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 EIF4E3Q8N5X7 224 aaKnown RBP7.52□□□□□ -1.21
LINC00558-201ENST00000569422 HSD17B11Q8NBQ5 300 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 OR5T1Q8NG75 326 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 OR4A4PQ8NGN8 299 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 IL1F10Q8WWZ1 152 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 TP53RKQ96S44 253 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 CITED2Q99967 270 aaPredicted RBP7.52□□□□□ -1.21
LINC00558-201ENST00000569422 TLNRD1Q9H1K6 362 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 HSF4Q9ULV5 492 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF729A6NN14 1252 aaPredicted RBP7.52□□□□□ -1.21
LINC00558-201ENST00000569422 CDX4O14627 284 aaPredicted RBP7.52□□□□□ -1.21
LINC00558-201ENST00000569422 C1QL1O75973 258 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 ADCYAP1P18509 176 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 CA6P23280 308 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 FHITP49789 147 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 NHLH2Q02577 135 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF616Q08AN1 781 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 Q5PR19 223 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 PUSL1Q8N0Z8 303 aaKnown RBP7.52□□□□□ -1.21
LINC00558-201ENST00000569422 HPSE2Q8WWQ2 592 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 AQP10Q96PS8 301 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 C1QTNF5Q9BXJ0 243 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 RGCCQ9H4X1 137 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 MTCH1Q9NZJ7 389 aa7.52□□□□□ -1.21
LINC00558-201ENST00000569422 UBE2J1Q9Y385 318 aaPredicted RBP7.52□□□□□ -1.21
LINC00558-201ENST00000569422 DSPP15924 2871 aaKnown RBP7.52□□□□□ -1.21
LINC00558-201ENST00000569422 TRAPPC2LH3BP13 241 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 M0R296 226 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 NME2P1O60361 137 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 ATG12O94817 140 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 PPYP01298 95 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 FAM157CP0CG43 387 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 SELEP16581 610 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 CD80P33681 288 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 CAV2P51636 162 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 ARG2P78540 354 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM187Q14656 261 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 LHFPL4Q7Z7J7 247 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 ZDHHC23Q8IYP9 409 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 STOML3Q8TAV4 291 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 GLYATL2Q8WU03 294 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 DNTTIP1Q9H147 329 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 RFNGQ9Y644 331 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 SVILO95425 2214 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 RP1L1Q8IWN7 2480 aaPredicted RBP7.51□□□□□ -1.21
LINC00558-201ENST00000569422 DNASE2O00115 360 aaPredicted RBP7.51□□□□□ -1.21
LINC00558-201ENST00000569422 DEDDO75618 318 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 DTYMKP23919 212 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 FLI1Q01543 452 aaPredicted RBP7.51□□□□□ -1.21
LINC00558-201ENST00000569422 SRSF6Q13247 344 aaKnown RBP7.51□□□□□ -1.21
LINC00558-201ENST00000569422 CLINT1Q14677 625 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 DHRS11Q6UWP2 260 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 Q6ZRG5 221 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 Q6ZSR3 168 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 SLC35G3Q8N808 338 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 CCDC54Q8NEL0 328 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 BOD1Q96IK1 185 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 SYT3Q9BQG1 590 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 RHOFQ9HBH0 211 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 LPAR3Q9UBY5 353 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 FGF16O43320 207 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 PRH1P02810 166 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 SP1P08047 785 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF44P15621 663 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 APLNRP35414 380 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 AKR1C3P42330 323 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 HOXA4Q00056 320 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms