RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 C16orf78Q8WTQ4 265 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 TSEN15Q8WW01 171 aaKnown RBP0.1□□□□□ -2.39
CDH1-211ENST00000567320 POTEKPQ9BYX7 375 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 BCL2L14Q9BZR8 327 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 ALX4Q9H161 411 aaPredicted RBP0.1□□□□□ -2.39
CDH1-211ENST00000567320 BABAM2Q9NXR7 383 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 PRO2289Q9P1D8 64 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 PEF1Q9UBV8 284 aaKnown RBP0.1□□□□□ -2.39
CDH1-211ENST00000567320 CFL2Q9Y281 166 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 WASHC3Q9Y3C0 194 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 DLG5Q8TDM6 1919 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 WDR19Q8NEZ3 1342 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 SBNO1A3KN83 1393 aa0.09□□□□□ -2.39
CDH1-211ENST00000567320 TRAV8-3A0A0A6YYJ7 113 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 IGKV1-12A0A0C4DH73 117 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 H7C2Y5 167 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 TRAPPC6AO75865 159 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 MYO1DO94832 1006 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 IGKV1D-12P01611 117 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 NQO1P15559 274 aaKnown RBP0.09□□□□□ -2.4
CDH1-211ENST00000567320 CD200P41217 278 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 RPL31P62899 125 aaKnown RBP0.09□□□□□ -2.4
CDH1-211ENST00000567320 SLC35B1P78383 322 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 SSX7Q7RTT5 188 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 LRRC28Q86X40 367 aaPredicted RBP0.09□□□□□ -2.4
CDH1-211ENST00000567320 ARL6IP6Q8N6S5 226 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 SPPL2BQ8TCT7 592 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 MBOAT7Q96N66 472 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 BEX2Q9BXY8 128 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 C16orf95Q9H693 158 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 MRPL22Q9NWU5 206 aaKnown RBP0.09□□□□□ -2.4
CDH1-211ENST00000567320 TRPM6Q9BX84 2022 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 NRCAMQ92823 1304 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 AK9Q5TCS8 1911 aa0.09□□□□□ -2.4
CDH1-211ENST00000567320 IGKV2D-26A0A0A0MRZ7 120 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 TRBV6-5A0A0K0K1A5 114 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 A0A1B0GXF2 115 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 OR8G3PP0DMU2 310 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 LIPCP11150 499 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 GABRA3P34903 492 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 P2RY2P41231 377 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 PLTPP55058 493 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 LCN2P80188 198 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 HOXC5Q00444 222 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 SLC38A11Q08AI6 406 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 CEACAM16Q2WEN9 425 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 UNQ6190/PRO20217Q6UXQ8 127 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 Q6ZTI0 123 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 OR2W3Q7Z3T1 314 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 GID4Q8IVV7 300 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 MICU2Q8IYU8 434 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 SLC35F6Q8N357 371 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 GATD1Q8NB37 220 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 CLHC1Q8NHS4 586 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 TFGQ92734 400 aaPredicted RBP0.08□□□□□ -2.4
CDH1-211ENST00000567320 NAT6Q93015 286 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 FAM131CQ96AQ9 280 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 Q96M85 177 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 ODF3Q96PU9 254 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 CHRNA10Q9GZZ6 450 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 NMRK1Q9NWW6 199 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 PSMD13Q9UNM6 376 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 KLK5Q9Y337 293 aaPredicted RBP0.08□□□□□ -2.4
CDH1-211ENST00000567320 C22orf24Q9Y442 160 aa0.08□□□□□ -2.4
CDH1-211ENST00000567320 PUS1Q9Y606 427 aaKnown RBP eCLIP0.08□□□□□ -2.4
CDH1-211ENST00000567320 ATRNO75882 1429 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 IGHV3OR15-7A0A075B7D8 119 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 IGHV3-15A0A0B4J1V0 119 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 LOC100653049A0A140TA62 436 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 PGPA6NDG6 321 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 GOLGA8TH3BQL2 631 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 K7EQS6 105 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 SPOPO43791 374 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 KRT34O76011 436 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 ZNF3P17036 446 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 INPP1P49441 399 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 RPL14P50914 215 aaKnown RBP0.07□□□□□ -2.4
CDH1-211ENST00000567320 PSMD4P55036 377 aaKnown RBP0.07□□□□□ -2.4
CDH1-211ENST00000567320 CLDN18P56856 261 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 ERHP84090 104 aaKnown RBP0.07□□□□□ -2.4
CDH1-211ENST00000567320 DEFB115Q30KQ5 88 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 NDUFAF6Q330K2 333 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 DUPD1Q68J44 220 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 ULK3Q6PHR2 472 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 GLT6D1Q7Z4J2 308 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 GAPTQ8N292 157 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 ATPAF2Q8N5M1 289 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 TRIML2Q8N7C3 387 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 RNF133Q8WVZ7 376 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 SMDT1Q9H4I9 107 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 AUNIPQ9H7T9 357 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 DNAJC27Q9NZQ0 273 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 POMPQ9Y244 141 aa0.07□□□□□ -2.4
CDH1-211ENST00000567320 TRAV8-7A0A075B6U6 113 aa0.06□□□□□ -2.4
CDH1-211ENST00000567320 IGHV3-73A0A0B4J1V6 119 aa0.06□□□□□ -2.4
CDH1-211ENST00000567320 TRAV25A0A0B4J276 109 aa0.06□□□□□ -2.4
CDH1-211ENST00000567320 C11orf86A6NJI1 115 aa0.06□□□□□ -2.4
CDH1-211ENST00000567320 RFPL4AA6NLU0 287 aa0.06□□□□□ -2.4
CDH1-211ENST00000567320 CENPXA8MT69 81 aa0.06□□□□□ -2.4
CDH1-211ENST00000567320 C9J4A7 227 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms