RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 SPCS3P61009 180 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 DAZAP2Q15038 168 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-215ENST00000566843 RNPS1Q15287 305 aaKnown RBP13.5□□□□□ -0.25
COMMD4-215ENST00000566843 SRSF7Q16629 238 aaKnown RBP eCLIP13.5□□□□□ -0.25
COMMD4-215ENST00000566843 RHBDD2Q6NTF9 364 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 CA5BP1Q8WTZ4 195 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 IL22RA2Q969J5 263 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 P2RX4Q99571 388 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 RBM24Q9BX46 236 aaKnown RBP13.5□□□□□ -0.25
COMMD4-215ENST00000566843 ACTR3CQ9C0K3 210 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-215ENST00000566843 SLC7A10Q9NS82 523 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 GNG13Q9P2W3 67 aa13.5□□□□□ -0.25
COMMD4-215ENST00000566843 A8MWP6 167 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 SYNGR3O43761 229 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 DUX1O43812 170 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 ZFAND5O76080 213 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 NRASP01111 189 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 MRPS34P82930 218 aaKnown RBP13.49□□□□□ -0.25
COMMD4-215ENST00000566843 FOXO1Q12778 655 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 KRTAP27-1Q3LI81 207 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 ACSF3Q4G176 576 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-215ENST00000566843 C4orf17Q53FE4 359 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 COA6Q5JTJ3 125 aaKnown RBP13.49□□□□□ -0.25
COMMD4-215ENST00000566843 OR4X1Q8NH49 305 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 DNASE2BQ8WZ79 361 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 SNX22Q96L94 193 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 SSX3Q99909 188 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 PYGO2Q9BRQ0 406 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 SMOC1Q9H4F8 434 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 SRD5A3Q9H8P0 318 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 RTTNQ86VV8 2226 aa13.49□□□□□ -0.25
COMMD4-215ENST00000566843 PIAS2O75928 621 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 GZMBP10144 247 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 CD27P26842 260 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 FUT6P51993 359 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 SSX2Q16385 188 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF385CQ66K41 422 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-215ENST00000566843 BEND2Q8NDZ0 799 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 OR2V1Q8NHB1 315 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 MISP3Q96FF7 219 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 CABLES2Q9BTV7 478 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 GPR87Q9BY21 358 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 WNT16Q9UBV4 365 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 A0A087WZY1 265 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 VAMP5O95183 116 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 AMBPP02760 352 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF818PQ6ZRF7 136 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 RABEPKQ7Z6M1 372 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 THNSL2Q86YJ6 484 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 MAML2Q8IZL2 1156 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-215ENST00000566843 OR10A7Q8NGE5 316 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 OR5D13Q8NGL4 314 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 RLN3Q8WXF3 142 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 RAB24Q969Q5 203 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 TAAR3PQ9P1P4 343 aa13.48□□□□□ -0.25
COMMD4-215ENST00000566843 RAB4BP61018 213 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 HNRNPKP61978 463 aaKnown RBP eCLIP13.47□□□□□ -0.25
COMMD4-215ENST00000566843 GAPTQ8N292 157 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 NDUFAF3Q9BU61 184 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF442Q9H7R0 627 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 RPRMQ9NS64 109 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 IGHV1OR15-9A0A0B4J2B8 117 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 A0A1B0GWJ7 208 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 TUSC2O75896 110 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 IFNA5P01569 189 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 SPIN3Q5JUX0 258 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF787Q6DD87 383 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 SYT13Q7L8C5 426 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF295-AS1Q8N0V1 137 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 ZIC4Q8N9L1 334 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 Q8NFD4 153 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 OR1P1Q8NH06 330 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 OR1F12Q8NHA8 337 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 SPACA9Q96E40 222 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-215ENST00000566843 NEU1Q99519 415 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 TPSD1Q9BZJ3 242 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF665Q9H7R5 613 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 CRLF2Q9HC73 371 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF391Q9UJN7 358 aa13.47□□□□□ -0.25
COMMD4-215ENST00000566843 MRPS17Q9Y2R5 130 aaKnown RBP13.47□□□□□ -0.25
COMMD4-215ENST00000566843 SLC22A20A6NK97 555 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 NPIPA2E9PIF3 369 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 NPIPA3F8WFD2 350 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 PFN1P07737 140 aaKnown RBP13.46□□□□□ -0.25
COMMD4-215ENST00000566843 PMS2P11Q13670 270 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 PDCD1Q15116 288 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF726P1Q15940 193 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 MPV17LQ2QL34 196 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 TRIM61Q5EBN2 209 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF664Q8N3J9 261 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 ZNF837Q96EG3 531 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-215ENST00000566843 ULBP2Q9BZM5 246 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 Q9N2K0 584 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 GON4LQ3T8J9 2241 aa13.46□□□□□ -0.25
COMMD4-215ENST00000566843 FAM90A10PA6NDY2 464 aa13.46□□□□□ -0.26
COMMD4-215ENST00000566843 FAM90A18PA6NE21 464 aa13.46□□□□□ -0.26
COMMD4-215ENST00000566843 FAM90A16PA6NEW6 464 aa13.46□□□□□ -0.26
COMMD4-215ENST00000566843 FAM90A20PA6NIJ5 464 aa13.46□□□□□ -0.26
COMMD4-215ENST00000566843 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.26
COMMD4-215ENST00000566843 FAM90A8PA6NJQ4 464 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms