RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ACER2Q5QJU3 275 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 ABLIM2Q6H8Q1 611 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 SPINK14Q6IE38 97 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 OR51H1Q8NH63 302 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 MAFAQ8NHW3 353 aaPredicted RBP12.22□□□□□ -0.45
CDH1-209ENST00000566510 RNASE11Q8TAA1 199 aaKnown RBP12.22□□□□□ -0.45
CDH1-209ENST00000566510 TCTEX1D2Q8WW35 142 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 ZNF251Q9BRH9 671 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 OR51B6Q9H340 312 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 CALHM2Q9HA72 323 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 ESPL1Q14674 2120 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 H0YL77 283 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 AP4M1O00189 453 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 IFNA17P01571 189 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 OR8U8P0C7N1 319 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
CDH1-209ENST00000566510 CYB561P49447 251 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 RAB1AP62820 205 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 PMS2CLQ68D20 193 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 FAM180AQ6UWF9 173 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 SNIP1Q8TAD8 396 aaKnown RBP12.21□□□□□ -0.45
CDH1-209ENST00000566510 ADGRG7Q96K78 797 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 GSN-AS1Q9NRJ2 163 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 MTCH1Q9NZJ7 389 aa12.21□□□□□ -0.45
CDH1-209ENST00000566510 PRRC2CQ9Y520 2896 aaKnown RBP12.21□□□□□ -0.45
CDH1-209ENST00000566510 VDAC1P21796 283 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 LMO1P25800 156 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 SPSB3Q6PJ21 355 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 ZDHHC23Q8IYP9 409 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 IL1F10Q8WWZ1 152 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 RDH5Q92781 318 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 HLA-CQ95604 372 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 RAB39BQ96DA2 213 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 ZNF488Q96MN9 340 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 PRDM14Q9GZV8 571 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 KIAA2026Q5HYC2 2103 aa12.21□□□□□ -0.46
CDH1-209ENST00000566510 CYTIPO60759 359 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 CLN5O75503 358 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 FGF12P61328 243 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 IZUMO4Q1ZYL8 232 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 ZNF429Q86V71 674 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 MKXQ8IYA7 352 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 CYB561D1Q8N8Q1 229 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 SPSB4Q96A44 273 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 HIST1H2AAQ96QV6 131 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 TCEAL7Q9BRU2 100 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 BCL2L14Q9BZR8 327 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 FGF23Q9GZV9 251 aaPredicted RBP12.2□□□□□ -0.46
CDH1-209ENST00000566510 C11orf1Q9H5F2 150 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 UNKLQ9H9P5 680 aaKnown RBP12.2□□□□□ -0.46
CDH1-209ENST00000566510 SYNGR1O43759 233 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 FOXG1P55316 489 aaPredicted RBP12.2□□□□□ -0.46
CDH1-209ENST00000566510 KIAA0141Q14154 515 aaPredicted RBP12.2□□□□□ -0.46
CDH1-209ENST00000566510 ZNF343Q6P1L6 599 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 PPP1R32Q7Z5V6 425 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 PRR18Q8N4B5 295 aa12.2□□□□□ -0.46
CDH1-209ENST00000566510 GNPNAT1Q96EK6 184 aaPredicted RBP12.2□□□□□ -0.46
CDH1-209ENST00000566510 TRAV20A0A0B4J274 112 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 IGKV1-6A0A0C4DH72 117 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 KIR2DS1A0A191URI9 304 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 NAPSAO96009 420 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 NGFP01138 241 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 IGHV2-5P01817 119 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 JMJD7P0C870 316 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 PMELP40967 661 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 KIR2DS4P43632 304 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 RPL23AP62750 156 aaKnown RBP12.19□□□□□ -0.46
CDH1-209ENST00000566510 DLK1P80370 383 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 KIR2DS1Q14954 304 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 HIKESHIQ53FT3 197 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 THNSL2Q86YJ6 484 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 TUSC5Q8IXB3 177 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 SIGLEC12Q96PQ1 595 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
CDH1-209ENST00000566510 PRRG4Q9BZD6 226 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 ZNF552Q9H707 407 aaPredicted RBP12.19□□□□□ -0.46
CDH1-209ENST00000566510 MIOXQ9UGB7 285 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 TCFL5Q9UL49 500 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 YIF1AO95070 293 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 SERPINE2P07093 398 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 EIF2S3P41091 472 aaKnown RBP12.19□□□□□ -0.46
CDH1-209ENST00000566510 ZFP36L1Q07352 338 aaKnown RBP12.19□□□□□ -0.46
CDH1-209ENST00000566510 TMEM267Q0VDI3 215 aaPredicted RBP12.19□□□□□ -0.46
CDH1-209ENST00000566510 FOXO1Q12778 655 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 ZNF674Q2M3X9 581 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 CEACAM21Q3KPI0 293 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 NMSQ5H8A3 153 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 C20orf204Q6ZNR8 217 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 ODF3L1Q8IXM7 274 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 PSMF1Q92530 271 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
CDH1-209ENST00000566510 KIAA1456Q9P272 454 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 ATP23Q9Y6H3 246 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
CDH1-209ENST00000566510 A0A1B0GW64 132 aa12.18□□□□□ -0.46
CDH1-209ENST00000566510 NTN3O00634 580 aaPredicted RBP12.18□□□□□ -0.46
CDH1-209ENST00000566510 PGLYRP1O75594 196 aaPredicted RBP12.18□□□□□ -0.46
CDH1-209ENST00000566510 SLC34A2O95436 690 aa12.18□□□□□ -0.46
CDH1-209ENST00000566510 SRP19P09132 144 aaKnown RBP12.18□□□□□ -0.46
CDH1-209ENST00000566510 UCP1P25874 307 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms