RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 DRAM1Q8N682 238 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 SUMF2Q8NBJ7 301 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 OR51T1Q8NGJ9 327 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 OR10X1Q8NGY0 326 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 PLPPR1Q8TBJ4 325 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 CCDC107Q8WV48 283 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 APH1BQ8WW43 257 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 CYGBQ8WWM9 190 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 GHSRQ92847 366 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 MYDGFQ969H8 173 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 TMEM106AQ96A25 262 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 ORAI1Q96D31 301 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 TMEM80Q96HE8 168 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 KIRREL1Q96J84 757 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 ZNF649Q9BS31 505 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 DPCDQ9BVM2 203 aaPredicted RBP5.12□□□□□ -1.59
TCF4-228ENST00000565393 JAM3Q9BX67 310 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 NCOR1P1Q9H4R4 102 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 FGF20Q9NP95 211 aaPredicted RBP5.12□□□□□ -1.59
TCF4-228ENST00000565393 TMEM138Q9NPI0 162 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 PAK1IP1Q9NWT1 392 aaPredicted RBP5.12□□□□□ -1.59
TCF4-228ENST00000565393 SMPD3Q9NY59 655 aaPredicted RBP5.12□□□□□ -1.59
TCF4-228ENST00000565393 CKLFQ9UBR5 152 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 ZNF281Q9Y2X9 895 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 WNK2Q9Y3S1 2297 aa5.12□□□□□ -1.59
TCF4-228ENST00000565393 A0A087X0M5 115 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 A0A1B0GX30 115 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 PSMB11A5LHX3 300 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 NCBP2LA6PVI3 153 aaKnown RBP5.11□□□□□ -1.59
TCF4-228ENST00000565393 ADARB2-AS1A8MUL3 147 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 SERPINE3A8MV23 424 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 MCRIP1C9JLW8 97 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 SDCBPO00560 298 aaPredicted RBP5.11□□□□□ -1.59
TCF4-228ENST00000565393 GEMIN2O14893 280 aaKnown RBP5.11□□□□□ -1.59
TCF4-228ENST00000565393 PIN1P1O15428 100 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 OGG1O15527 345 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 WBP4O75554 376 aaKnown RBP5.11□□□□□ -1.59
TCF4-228ENST00000565393 CLIC3O95833 236 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 IL1AP01583 271 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 GTF2F2P13984 249 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 SERPINA2P20848 420 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 RAB7AP51149 207 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 MADCAM1Q13477 382 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 RIPK1Q13546 671 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 DIAPH2-AS1Q14236 149 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 IL13RA2Q14627 380 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 SLC22A6Q4U2R8 563 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 TCTEX1D4Q5JR98 221 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 KPRPQ5T749 579 aaPredicted RBP5.11□□□□□ -1.59
TCF4-228ENST00000565393 RSBN1Q5VWQ0 802 aaPredicted RBP5.11□□□□□ -1.59
TCF4-228ENST00000565393 FOXB2Q5VYV0 432 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 TTC23Q5W5X9 447 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 XAF1Q6GPH4 301 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 SLC16A12Q6ZSM3 486 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 DHRSXQ8N5I4 330 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 ZFP41Q8N8Y5 198 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 WFDC9Q8NEX5 89 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 OR10A7Q8NGE5 316 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 OR56B4Q8NH76 319 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 UBALD1Q8TB05 177 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 ARL11Q969Q4 196 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 NECAP2Q9NVZ3 263 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 ZNF581Q9P0T4 197 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 CLEC2DQ9UHP7 191 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 TRAPPC2LQ9UL33 140 aa5.11□□□□□ -1.59
TCF4-228ENST00000565393 EXOSC1Q9Y3B2 195 aaKnown RBP5.11□□□□□ -1.59
TCF4-228ENST00000565393 SIRT4Q9Y6E7 314 aaPredicted RBP5.11□□□□□ -1.59
TCF4-228ENST00000565393 IGHV3-72A0A0B4J1Y9 119 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 PNMA8CA0A1B0GUJ8 204 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 TMEM30CPA0ZSE6 113 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 NUDT19A8MXV4 375 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 NPIPB11E5RHQ5 1161 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 CCRL2O00421 344 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 ZNF780AO75290 641 aaPredicted RBP5.1□□□□□ -1.59
TCF4-228ENST00000565393 MPIG6BO95866 241 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 IGKV1D-33P01593 117 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 IGKV1-33P01594 117 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 MT-ND4P03905 459 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 MAS1P04201 325 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 AMY1AP04745 511 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 AMY2AP04746 511 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 SSTR5P35346 364 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 REG1BP48304 166 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 KCNJ3P48549 501 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 SLC35A2P78381 396 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 ST3GAL4Q11206 333 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 Q499Y3 187 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 ZNF529Q6P280 563 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 C10orf99Q6UWK7 81 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 GLIPR1L1Q6UWM5 242 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 Q6ZPA2 131 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 SLC35E3Q7Z769 313 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 ZNF329Q86UD4 541 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 PRR18Q8N4B5 295 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 JAGN1Q8N5M9 183 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 SETD9Q8NE22 299 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 Q8NFD4 153 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 OR13C5Q8NGS8 318 aa5.1□□□□□ -1.59
TCF4-228ENST00000565393 WIPF2Q8TF74 440 aaPredicted RBP5.1□□□□□ -1.59
TCF4-228ENST00000565393 RGP1Q92546 391 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms