RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 TMEM30CPA0ZSE6 113 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 GOSR2O14653 212 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 SFT2D2O95562 160 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 DIRAS3O95661 229 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 ZNF728P0DKX0 622 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 PSG2P11465 335 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 APOBEC3AP31941 199 aaPredicted RBP16.43■□□□□ 0.22
CLN6-205ENST00000564846 PRDX2P32119 198 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 RAP2BP61225 183 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 HERV-K104P61576 105 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 SEC61A1P61619 476 aaKnown RBP16.43■□□□□ 0.22
CLN6-205ENST00000564846 COL10A1Q03692 680 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 TFF3Q07654 80 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 KCNJ8Q15842 424 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 FAM209AQ5JX71 171 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 SLC35E4Q6ICL7 350 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 C11orf88Q6PI97 169 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 ZNF808Q8N4W9 903 aaPredicted RBP16.43■□□□□ 0.22
CLN6-205ENST00000564846 OR11L1Q8NGX0 322 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 FXYD6Q9H0Q3 95 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 MBNL3Q9NUK0 354 aaKnown RBP16.43■□□□□ 0.22
CLN6-205ENST00000564846 PCDHB10Q9UN67 800 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 FAM172BPA6NC97 362 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 BET1O15155 118 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 PPYP01298 95 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 AADACP22760 399 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 NFYAP23511 347 aaPredicted RBP16.43■□□□□ 0.22
CLN6-205ENST00000564846 HERPUD1Q15011 391 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 TESK1Q15569 626 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 C2orf68Q2NKX9 166 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 LPCAT3Q6P1A2 487 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 ZNF486Q96H40 463 aaPredicted RBP16.43■□□□□ 0.22
CLN6-205ENST00000564846 CHIAQ9BZP6 476 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 PIPOXQ9P0Z9 390 aa16.43■□□□□ 0.22
CLN6-205ENST00000564846 PLCE1Q9P212 2302 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 ZNF205O95201 554 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 GNLYP22749 145 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 FXYD4P59646 89 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 PAX5Q02548 391 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 EFNB3Q15768 340 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 SLC38A6Q8IZM9 456 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 CD177Q8N6Q3 437 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 BOLLQ8N9W6 283 aaKnown RBP16.42■□□□□ 0.22
CLN6-205ENST00000564846 OR5T2Q8NGG2 359 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 OR2T35Q8NGX2 323 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 CASTOR1Q8WTX7 329 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 TOMM40LQ969M1 308 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 CABLES2Q9BTV7 478 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 EGLN1Q9GZT9 426 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 PPP1R3CQ9UQK1 317 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 NBEAQ8NFP9 2946 aa16.42■□□□□ 0.22
CLN6-205ENST00000564846 IGKV1-6A0A0C4DH72 117 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 IRF2P14316 349 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 HLA-GP17693 338 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 AGAP20933 346 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 OR3A1P47881 315 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 H2BFSP57053 126 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 SUPT4H1P63272 117 aaKnown RBP16.41■□□□□ 0.22
CLN6-205ENST00000564846 LIN54Q6MZP7 749 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 PIK3IP1Q96FE7 263 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 COL6A6A6NMZ7 2263 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 IGKV1D-17A0A075B6S4 117 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 A0A0B4J2A0 478 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 B9A039 149 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 TUSC2O75896 110 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 RPS2P15880 293 aaKnown RBP16.41■□□□□ 0.22
CLN6-205ENST00000564846 UQCRFS1P47985 274 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 CLEC18BQ6UXF7 455 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 PPP1R35Q8TAP8 253 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 FAM222BQ8WU58 562 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 SHARPINQ9H0F6 387 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 MS4A5Q9H3V2 200 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 SHPKQ9UHJ6 478 aa16.41■□□□□ 0.22
CLN6-205ENST00000564846 ACACBO00763 2458 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 TRBV6-7A0A0A0MS04 114 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 NPIPB11E5RHQ5 1161 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 ZNF737O75373 536 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 CLDN14O95500 239 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 DNASE1P24855 282 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 CCL8P80075 99 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 ABCA11PQ4W5N1 156 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 C5orf24Q7Z6I8 188 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 SGPP2Q8IWX5 399 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 ASCC1Q8N9N2 400 aaKnown RBP16.4■□□□□ 0.22
CLN6-205ENST00000564846 OR5M8Q8NGP6 311 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 OR10J5Q8NHC4 309 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 COQ8AQ8NI60 647 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 NEUROG1Q92886 237 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 RSRP1Q9BUV0 290 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 DYNLRB1Q9NP97 96 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 CISD1Q9NZ45 108 aaKnown RBP16.4■□□□□ 0.22
CLN6-205ENST00000564846 KCNIP1Q9NZI2 227 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 OPN4Q9UHM6 478 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 METRNQ9UJH8 293 aa16.4■□□□□ 0.22
CLN6-205ENST00000564846 CHD3Q12873 2000 aaKnown RBP16.39■□□□□ 0.22
CLN6-205ENST00000564846 CRYM-AS1A6NIL9 109 aa16.39■□□□□ 0.21
CLN6-205ENST00000564846 LRRC30A6NM36 301 aa16.39■□□□□ 0.21
CLN6-205ENST00000564846 SIX6O95475 246 aa16.39■□□□□ 0.21
CLN6-205ENST00000564846 PIGPP57054 158 aa16.39■□□□□ 0.21
CLN6-205ENST00000564846 AESQ08117 197 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms