RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 MYPOPQ86VE0 399 aaPredicted RBP4.81□□□□□ -1.64
CHD9-210ENST00000564582 WDR5BQ86VZ2 330 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 LYPD6Q86Y78 171 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 FAM89BQ8N5H3 189 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 AMER3Q8N944 861 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 ADAD2Q8NCV1 583 aaKnown RBP4.81□□□□□ -1.64
CHD9-210ENST00000564582 ZNF740Q8NDX6 193 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 CSNK2A3Q8NEV1 391 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 OR1N1Q8NGS0 311 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 OR2T10Q8NGZ9 312 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 CLDND2Q8NHS1 167 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 SCGB1C1Q8TD33 95 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 GRHL3Q8TE85 626 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 TNFRSF14Q92956 283 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 OR10C1Q96KK4 312 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 TIMM29Q9BSF4 260 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 RTBDNQ9BSG5 229 aaPredicted RBP4.81□□□□□ -1.64
CHD9-210ENST00000564582 TMEM204Q9BSN7 226 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 ABHD6Q9BV23 337 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 TMEM59Q9BXS4 323 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 OR51I2Q9H344 312 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 BANF2Q9H503 90 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 TXNRD2Q9NNW7 524 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 MANBALQ9NQG1 85 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 SLC2A9Q9NRM0 540 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 SLC35D1Q9NTN3 355 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 TMEM106BQ9NUM4 274 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 LIN7CQ9NUP9 197 aaKnown RBP4.81□□□□□ -1.64
CHD9-210ENST00000564582 ELOVL5Q9NYP7 299 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 OR6C3Q9NZP0 311 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 SH3BGRL2Q9UJC5 107 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 HSF4Q9ULV5 492 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 MDC1Q14676 2089 aaKnown RBP4.81□□□□□ -1.64
CHD9-210ENST00000564582 MYO10Q9HD67 2058 aa4.81□□□□□ -1.64
CHD9-210ENST00000564582 CASP8AP2Q9UKL3 1982 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 MEIS3P1A6NDR6 274 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 ZNF705FA8MVS1 300 aaPredicted RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 ACTL6BO94805 426 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 GJB5O95377 273 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 PNPP00491 289 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 IGHMP01871 453 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 MT-ND6P03923 174 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 HPNP05981 417 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 ASAH2BP0C7U1 165 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 ZNF705DP0CH99 300 aaPredicted RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 ZNF705BP0CI00 300 aaPredicted RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 SLC35E2P0CK97 266 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 LIPCP11150 499 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 TCN2P20062 427 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 ZNF93P35789 620 aaPredicted RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 APOBEC1P41238 236 aaKnown RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 PSMB3P49720 205 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 RAB7AP51149 207 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 BIDP55957 195 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 SLC37A1P57057 533 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 RBX1P62877 108 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 SUPT4H1P63272 117 aaKnown RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 HBG1P69891 147 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 HBG2P69892 147 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 RPP30P78346 268 aaKnown RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 BTN3A2P78410 334 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 SLC9A3R2Q15599 337 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 MEP1BQ16820 701 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 PCK2Q16822 640 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 BSXQ3C1V8 233 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 ANKRD55Q3KP44 614 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 TMEM52BQ4KMG9 183 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 ACTL10Q5JWF8 245 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 C19orf35Q6ZS72 473 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 DPY19L4Q7Z388 723 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 OR4C5Q8NGB2 326 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 OR51G1Q8NGK1 321 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 OR52N5Q8NH56 324 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 OR2V1Q8NHB1 315 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 CA5BP1Q8WTZ4 195 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 KLK6Q92876 244 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 TMEM230Q96A57 120 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 SLAMF6Q96DU3 332 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 NUS1Q96E22 293 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 TSSK2Q96PF2 358 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 CIB3Q96Q77 187 aaPredicted RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 RAB40CQ96S21 281 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 GABRG3Q99928 467 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 NICN1Q9BSH3 213 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 SCNM1Q9BWG6 230 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 ZBP1Q9H171 429 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 NAA60Q9H7X0 242 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 WFDC1Q9HC57 220 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 DNAJC4Q9NNZ3 241 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 TMEM9BQ9NQ34 198 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.8□□□□□ -1.64
CHD9-210ENST00000564582 GLRX2Q9NS18 164 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 NECAP2Q9NVZ3 263 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 ZNF586Q9NXT0 402 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 EHFQ9NZC4 300 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 VDAC3Q9Y277 283 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 LSM5Q9Y4Y9 91 aaKnown RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 TIMM9Q9Y5J7 89 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 TNFRSF18Q9Y5U5 241 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms