RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 PRDM13Q9H4Q3 707 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 ZMAT3Q9HA38 289 aaKnown RBP13.68□□□□□ -0.22
RNF40-206ENST00000564260 ETV7Q9Y603 341 aa13.68□□□□□ -0.22
RNF40-206ENST00000564260 MEIKINA0A087WXM9 373 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 KBTBD11-OT1A0A1B0GTJ5 212 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 GABARAPO95166 117 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 TFAP2AP05549 437 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 IGHV1-8P0DP01 117 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 IGHV4-38-2P0DP08 117 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 CHATP28329 748 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 OR10A3P58181 314 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 HES5Q5TA89 166 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 GPR141Q7Z602 305 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 RTN4RL2Q86UN3 420 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 NR2C2APQ86WQ0 139 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 NEK7Q8TDX7 302 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 LHX4Q969G2 390 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 ETAA1Q9NY74 926 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 MGAT4AQ9UM21 535 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 SESN1Q9Y6P5 492 aa13.67□□□□□ -0.22
RNF40-206ENST00000564260 HSPB6O14558 160 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 TCF21O43680 179 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 ORC5O43913 435 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 CGB3P0DN86 165 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 CGB7P0DN87 165 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 CCL3L1P16619 93 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 RPL5P46777 297 aaKnown RBP13.66□□□□□ -0.22
RNF40-206ENST00000564260 DYNC1I2Q13409 638 aaKnown RBP13.66□□□□□ -0.22
RNF40-206ENST00000564260 Q3ZCU0 254 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 C6orf183Q5T699 404 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 SIGIRRQ6IA17 410 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 RBMS3Q6XE24 437 aaKnown RBP13.66□□□□□ -0.22
RNF40-206ENST00000564260 OR11H6Q8NGC7 330 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 ZFAND2BQ8WV99 257 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 KCTD12Q96CX2 325 aaKnown RBP13.66□□□□□ -0.22
RNF40-206ENST00000564260 SIRT7Q9NRC8 400 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 ABRACLQ9P1F3 81 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 ZNF69Q9UC07 566 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 SCOCQ9UIL1 159 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 KIF25Q9UIL4 384 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 ARHGAP32A7KAX9 2087 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 C2CD3Q4AC94 2353 aa13.66□□□□□ -0.22
RNF40-206ENST00000564260 A0A087X0M5 115 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 A0A0A6YYH2 397 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 TMEM272A0A1B0GTI8 110 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 A0A1B0GX30 115 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 A6NJ64 397 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 NPIPB11E5RHQ5 1161 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 RNASEK-C17orf49H0YIS7 233 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 MT-ND4P03905 459 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 CD34P28906 385 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 BLVRBP30043 206 aaPredicted RBP13.65□□□□□ -0.22
RNF40-206ENST00000564260 CLDN12P56749 244 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 HILS1P60008 231 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 OR10K2Q6IF99 312 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 MOB1BQ7L9L4 216 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 TPRX1Q8N7U7 411 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 OR52M1Q8NGK5 317 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 PLPPR1Q8TBJ4 325 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 CREB3L1Q96BA8 519 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
RNF40-206ENST00000564260 PLEKHJ1Q9NW61 149 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 DAPK2Q9UIK4 370 aa13.65□□□□□ -0.22
RNF40-206ENST00000564260 TBL2Q9Y4P3 447 aaKnown RBP13.65□□□□□ -0.22
RNF40-206ENST00000564260 TRBV6-6A0A0A6YYG2 114 aa13.64□□□□□ -0.23
RNF40-206ENST00000564260 FOXI3A8MTJ6 420 aaPredicted RBP13.64□□□□□ -0.23
RNF40-206ENST00000564260 CLDN34H7C241 214 aa13.64□□□□□ -0.23
RNF40-206ENST00000564260 NPFFO15130 113 aa13.64□□□□□ -0.23
RNF40-206ENST00000564260 GLP1RP43220 463 aa13.64□□□□□ -0.23
RNF40-206ENST00000564260 TMEM86BQ8N661 226 aa13.64□□□□□ -0.23
RNF40-206ENST00000564260 SLC25A46Q96AG3 418 aa13.64□□□□□ -0.23
RNF40-206ENST00000564260 TMEM133Q9H2Q1 129 aa13.64□□□□□ -0.23
RNF40-206ENST00000564260 CALYQ9NYX4 217 aa13.64□□□□□ -0.23
RNF40-206ENST00000564260 SERPINE3A8MV23 424 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 FBP1P09467 338 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 CDK2P24941 298 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 AANATQ16613 207 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 MINOS1Q5TGZ0 78 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 ZNF626Q68DY1 528 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 HCP5Q6MZN7 132 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 Q6ZTK2 550 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 OR13A1Q8NGR1 328 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 ZNF596Q8TC21 504 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 RAB2BQ8WUD1 216 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 NICN1Q9BSH3 213 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 CLEC7AQ9BXN2 247 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 SPATA2Q9UM82 520 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 MINOS1-NBL1R4GNA1 71 aa13.63□□□□□ -0.23
RNF40-206ENST00000564260 A0A0A6YYD4 124 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 ODF3BA8MYP8 253 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 NAPSAO96009 420 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 VEGFCP49767 419 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 TMBIM6P55061 237 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 LGALS4P56470 323 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 MXD1Q05195 221 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 CTF1Q16619 201 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 C17orf58Q2M2W7 97 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 NKAPLQ5M9Q1 402 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 LDLRAD3Q86YD5 345 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms