RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 CALYQ9NYX4 217 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 TCF19Q9Y242 345 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 TRAV39A0A0B4J263 110 aa24.8■■□□□ 1.56
CMTM4-204ENST00000563952 GABRA5P31644 462 aa24.8■■□□□ 1.56
CMTM4-204ENST00000563952 PRR31Q5SQ13 230 aa24.8■■□□□ 1.56
CMTM4-204ENST00000563952 TMEM219Q86XT9 240 aa24.8■■□□□ 1.56
CMTM4-204ENST00000563952 NEK7Q8TDX7 302 aa24.8■■□□□ 1.56
CMTM4-204ENST00000563952 ZNF696Q9H7X3 374 aa24.8■■□□□ 1.56
CMTM4-204ENST00000563952 TCF7L1Q9HCS4 588 aa24.8■■□□□ 1.56
CMTM4-204ENST00000563952 F2RL2O00254 374 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 TOR1AO14656 332 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 ATP6V1G2O95670 118 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 HSMCR30P0CW71 290 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 CGB3P0DN86 165 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 CGB7P0DN87 165 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 CRHBPP24387 322 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 LIPKQ5VXJ0 399 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 UNQ9370/PRO34162Q6UXP9 181 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 UFD1Q92890 307 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 KIRREL1Q96J84 757 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 CITED1Q99966 193 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 BANF2Q9H503 90 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 DPM3Q9P2X0 92 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 SIGLEC9Q9Y336 463 aa24.79■■□□□ 1.56
CMTM4-204ENST00000563952 CD34P28906 385 aa24.78■■□□□ 1.56
CMTM4-204ENST00000563952 PAX5Q02548 391 aa24.78■■□□□ 1.56
CMTM4-204ENST00000563952 LTC4SQ16873 150 aa24.78■■□□□ 1.56
CMTM4-204ENST00000563952 UTF1Q5T230 341 aa24.78■■□□□ 1.56
CMTM4-204ENST00000563952 CCBE1Q6UXH8 406 aaPredicted RBP24.78■■□□□ 1.56
CMTM4-204ENST00000563952 CEACAM19Q7Z692 300 aa24.78■■□□□ 1.56
CMTM4-204ENST00000563952 NPFFR1Q9GZQ6 430 aa24.78■■□□□ 1.56
CMTM4-204ENST00000563952 NBEAL1Q6ZS30 2694 aa24.78■■□□□ 1.56
CMTM4-204ENST00000563952 MEGF11A6BM72 1044 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 A6NDX4 124 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 IL1AP01583 271 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 IGLV1-47P01700 117 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 PRRX1P54821 245 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 RBM39Q14498 530 aaKnown RBP24.77■■□□□ 1.56
CMTM4-204ENST00000563952 RBM48Q5RL73 367 aaKnown RBP24.77■■□□□ 1.56
CMTM4-204ENST00000563952 LYPD6Q86Y78 171 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 RFESDQ8TAC1 157 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 TMEM203Q969S6 136 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 UQCC2Q9BRT2 126 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 IDI2-AS1Q9NZ38 188 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 FBLN5Q9UBX5 448 aa24.77■■□□□ 1.56
CMTM4-204ENST00000563952 A0A087X0M5 115 aa24.76■■□□□ 1.55
CMTM4-204ENST00000563952 A0A1B0GX30 115 aa24.76■■□□□ 1.55
CMTM4-204ENST00000563952 TMEM30CPA0ZSE6 113 aa24.76■■□□□ 1.55
CMTM4-204ENST00000563952 CRTAPO75718 401 aaPredicted RBP24.76■■□□□ 1.55
CMTM4-204ENST00000563952 SSTR5P35346 364 aa24.76■■□□□ 1.55
CMTM4-204ENST00000563952 DYNLT3P51808 116 aa24.76■■□□□ 1.55
CMTM4-204ENST00000563952 GP2P55259 537 aaKnown RBP24.76■■□□□ 1.55
CMTM4-204ENST00000563952 GPR50Q13585 617 aa24.76■■□□□ 1.55
CMTM4-204ENST00000563952 MRPS24Q96EL2 167 aaKnown RBP24.76■■□□□ 1.55
CMTM4-204ENST00000563952 SELENOIQ9C0D9 397 aa24.76■■□□□ 1.55
CMTM4-204ENST00000563952 RANBP3Q9H6Z4 567 aaPredicted RBP24.76■■□□□ 1.55
CMTM4-204ENST00000563952 PITPNC1Q9UKF7 332 aa24.76■■□□□ 1.55
CMTM4-204ENST00000563952 LEUTXA8MZ59 168 aa24.75■■□□□ 1.55
CMTM4-204ENST00000563952 IGHV3-7P01780 117 aa24.75■■□□□ 1.55
CMTM4-204ENST00000563952 MGMTP16455 207 aa24.75■■□□□ 1.55
CMTM4-204ENST00000563952 MAP2K4P45985 399 aa24.75■■□□□ 1.55
CMTM4-204ENST00000563952 HLA-DRB5Q30154 266 aa24.75■■□□□ 1.55
CMTM4-204ENST00000563952 PRSS48Q7RTY5 328 aa24.75■■□□□ 1.55
CMTM4-204ENST00000563952 TMEM104Q8NE00 496 aa24.75■■□□□ 1.55
CMTM4-204ENST00000563952 LEAP2Q969E1 77 aa24.75■■□□□ 1.55
CMTM4-204ENST00000563952 KIR2DS4P43632 304 aa24.74■■□□□ 1.55
CMTM4-204ENST00000563952 HSD17B12Q53GQ0 312 aa24.74■■□□□ 1.55
CMTM4-204ENST00000563952 LRRTM1Q86UE6 522 aa24.74■■□□□ 1.55
CMTM4-204ENST00000563952 OR9G1Q8NH87 305 aa24.74■■□□□ 1.55
CMTM4-204ENST00000563952 OR2T6Q8NHC8 308 aa24.74■■□□□ 1.55
CMTM4-204ENST00000563952 CCDC107Q8WV48 283 aa24.74■■□□□ 1.55
CMTM4-204ENST00000563952 SPACA1Q9HBV2 294 aa24.74■■□□□ 1.55
CMTM4-204ENST00000563952 RAB26Q9ULW5 256 aa24.74■■□□□ 1.55
CMTM4-204ENST00000563952 BUB1B-PAK6H3BSN5 160 aa24.73■■□□□ 1.55
CMTM4-204ENST00000563952 CEACAM3P40198 252 aa24.73■■□□□ 1.55
CMTM4-204ENST00000563952 VHLP40337 213 aa24.73■■□□□ 1.55
CMTM4-204ENST00000563952 PHYHIPQ92561 330 aa24.73■■□□□ 1.55
CMTM4-204ENST00000563952 FAM46BQ96A09 425 aa24.73■■□□□ 1.55
CMTM4-204ENST00000563952 CREB3L1Q96BA8 519 aa24.73■■□□□ 1.55
CMTM4-204ENST00000563952 LINC00574Q9H8X3 128 aa24.73■■□□□ 1.55
CMTM4-204ENST00000563952 MCRIP1C9JLW8 97 aa24.72■■□□□ 1.55
CMTM4-204ENST00000563952 NPIPB11E5RHQ5 1161 aa24.72■■□□□ 1.55
CMTM4-204ENST00000563952 SC5DO75845 299 aa24.72■■□□□ 1.55
CMTM4-204ENST00000563952 SRMP19623 302 aa24.72■■□□□ 1.55
CMTM4-204ENST00000563952 RPS25P62851 125 aaKnown RBP24.72■■□□□ 1.55
CMTM4-204ENST00000563952 TPBGQ13641 420 aa24.72■■□□□ 1.55
CMTM4-204ENST00000563952 GLT8D1Q68CQ7 371 aa24.72■■□□□ 1.55
CMTM4-204ENST00000563952 RAB12Q6IQ22 244 aa24.72■■□□□ 1.55
CMTM4-204ENST00000563952 ISYNA1Q9NPH2 558 aa24.72■■□□□ 1.55
CMTM4-204ENST00000563952 RCC2Q9P258 522 aaKnown RBP24.72■■□□□ 1.55
CMTM4-204ENST00000563952 AIPO00170 330 aa24.71■■□□□ 1.55
CMTM4-204ENST00000563952 UCHL1P09936 223 aa24.71■■□□□ 1.55
CMTM4-204ENST00000563952 CD24P25063 80 aa24.71■■□□□ 1.55
CMTM4-204ENST00000563952 ARHGDIBP52566 201 aa24.71■■□□□ 1.55
CMTM4-204ENST00000563952 EFNB2P52799 333 aa24.71■■□□□ 1.55
CMTM4-204ENST00000563952 MLLT11Q13015 90 aaPredicted RBP24.71■■□□□ 1.55
CMTM4-204ENST00000563952 TPTE2P1Q5T6R2 138 aa24.71■■□□□ 1.55
CMTM4-204ENST00000563952 ZNF497Q6ZNH5 498 aa24.71■■□□□ 1.55
CMTM4-204ENST00000563952 MMP28Q9H239 520 aa24.71■■□□□ 1.55
CMTM4-204ENST00000563952 BLOC1S6Q9UL45 172 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms