RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 TOR1AO14656 332 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 WIPF1O43516 503 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 SC5DO75845 299 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 ARL6IP5O75915 188 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 UCHL1P09936 223 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 GZMHP20718 246 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 MDKP21741 143 aaPredicted RBP10.86□□□□□ -0.67
CLK3-213ENST00000563842 OMGP23515 440 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 HTR1DP28221 377 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 CD34P28906 385 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 GLP1RP43220 463 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 ARHGDIBP52566 201 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 PRRX1P54821 245 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 GABARAPL2P60520 117 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
CLK3-213ENST00000563842 SLC35E4Q6ICL7 350 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 ZNF367Q7RTV3 350 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 LHFPL4Q7Z7J7 247 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 LYPD6Q86Y78 171 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 ABHD12Q8N2K0 398 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 SVOPQ8N4V2 548 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 OR10A7Q8NGE5 316 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 NEK7Q8TDX7 302 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 C17orf50Q8WW18 174 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 AJUBAQ96IF1 538 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 YTHDF1Q9BYJ9 559 aaKnown RBP10.86□□□□□ -0.67
CLK3-213ENST00000563842 PPIL3Q9H2H8 161 aaKnown RBP10.86□□□□□ -0.67
CLK3-213ENST00000563842 KIF25Q9UIL4 384 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 PITPNC1Q9UKF7 332 aa10.86□□□□□ -0.67
CLK3-213ENST00000563842 ANK2Q01484 3957 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 TMEM30CPA0ZSE6 113 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 MCRIP1C9JLW8 97 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 DENRO43583 198 aaKnown RBP10.85□□□□□ -0.67
CLK3-213ENST00000563842 CRTAPO75718 401 aaPredicted RBP10.85□□□□□ -0.67
CLK3-213ENST00000563842 GLAP06280 429 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 MGMTP16455 207 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 CEACAM3P40198 252 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 FAM189A2Q15884 450 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 SSX2Q16385 188 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 PRAMEF5Q5TYX0 476 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 OLFML2AQ68BL7 652 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 SGMS2Q8NHU3 365 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 TMEM203Q969S6 136 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 RAB9BQ9NP90 201 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 ACOT13Q9NPJ3 140 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 DPM3Q9P2X0 92 aa10.85□□□□□ -0.67
CLK3-213ENST00000563842 A0A087X0M5 115 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 A0A1B0GX30 115 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 A0A1W2PP11 408 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 CA11O75493 328 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 MMP23AO75900 390 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 IL1AP01583 271 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 CGB3P0DN86 165 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 CGB7P0DN87 165 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 GABRA5P31644 462 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 MAP2K4P45985 399 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 PSMD7P51665 324 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 DYNLT3P51808 116 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 RELBQ01201 579 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 INSL4Q14641 139 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 C17orf58Q2M2W7 97 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 C1orf100Q5SVJ3 147 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 FAM27D1Q5T7N8 215 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 SLC16A12Q6ZSM3 486 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 LRRTM1Q86UE6 522 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 OR13A1Q8NGR1 328 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 SELENOIQ9C0D9 397 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 BANF2Q9H503 90 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 C16orf95Q9H693 158 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 LINC00574Q9H8X3 128 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 IDI2-AS1Q9NZ38 188 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 RRP15Q9Y3B9 282 aaKnown RBP10.84□□□□□ -0.67
CLK3-213ENST00000563842 RNF114Q9Y508 228 aa10.84□□□□□ -0.67
CLK3-213ENST00000563842 LEUTXA8MZ59 168 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 TSPAN9O75954 239 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 FUT3P21217 361 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 NFYBP25208 207 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 HTR2CP28335 458 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 GP2P55259 537 aaKnown RBP10.83□□□□□ -0.68
CLK3-213ENST00000563842 RPS25P62851 125 aaKnown RBP10.83□□□□□ -0.68
CLK3-213ENST00000563842 LY6EQ16553 131 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 RAB12Q6IQ22 244 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 Q6ZSV7 163 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 OR6M1Q8NGM8 313 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 OR9G1Q8NH87 305 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 KCNG3Q8TAE7 436 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 MRGPRDQ8TDS7 321 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 KIRREL1Q96J84 757 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 Q96M66 194 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 RANBP3Q9H6Z4 567 aaPredicted RBP10.83□□□□□ -0.68
CLK3-213ENST00000563842 ETAA1Q9NY74 926 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 RCC2Q9P258 522 aaKnown RBP10.83□□□□□ -0.68
CLK3-213ENST00000563842 AMMECR1Q9Y4X0 333 aaPredicted RBP10.83□□□□□ -0.68
CLK3-213ENST00000563842 LRRC42Q9Y546 428 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 HILPDAQ9Y5L2 63 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 PEX16Q9Y5Y5 336 aa10.83□□□□□ -0.68
CLK3-213ENST00000563842 OOSP1A8MZH6 123 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms