RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 OCMP0CE72 109 aaPredicted RBP13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 ZNF19P17023 458 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 GLP1RP43220 463 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 ALKBH1Q13686 389 aaKnown RBP13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 C8orf86Q6ZUL3 223 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 C8orf59Q8N0T1 100 aaPredicted RBP13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 RPEQ96AT9 228 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 ANKRD60Q9BZ19 345 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 Q9H521 79 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 CALYQ9NYX4 217 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 OR6C3Q9NZP0 311 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 KIF25Q9UIL4 384 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 PSG11Q9UQ72 335 aa13.27□□□□□ -0.29
HDGFL3-203ENST00000563404 LINC01548A6NM66 108 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 DENRO43583 198 aaKnown RBP13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 TMEM225BP0DP42 221 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 MYF6P23409 242 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 CD69Q07108 199 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 KISS1Q15726 138 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 PLPPR1Q8TBJ4 325 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 C4orf36Q96KX1 117 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 NR1H4Q96RI1 486 aaPredicted RBP13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 P2RX4Q99571 388 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 LINC00574Q9H8X3 128 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 MRPS18AQ9NVS2 196 aaKnown RBP13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 IDI2-AS1Q9NZ38 188 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 AASSQ9UDR5 926 aa13.26□□□□□ -0.29
HDGFL3-203ENST00000563404 MEIKINA0A087WXM9 373 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 NPIPB11E5RHQ5 1161 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 IL1AP01583 271 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 HCKP08631 526 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 TMEM11P17152 192 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 HNF4GQ14541 408 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 LTC4SQ16873 150 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 RSBN1Q5VWQ0 802 aaPredicted RBP13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 OR51D1Q8NGF3 324 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 RFESDQ8TAC1 157 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 CHPT1Q8WUD6 406 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 LGALS12Q96DT0 336 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 DUX3Q96PT4 197 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 ISG20L2Q9H9L3 353 aaKnown RBP13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 PCDHB16Q9NRJ7 776 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 ZNF581Q9P0T4 197 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 EXOGQ9Y2C4 368 aaKnown RBP13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 AMMECR1Q9Y4X0 333 aaPredicted RBP13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 LRRC42Q9Y546 428 aa13.25□□□□□ -0.29
HDGFL3-203ENST00000563404 TRAV39A0A0B4J263 110 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 SULT1B1O43704 296 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 WBP4O75554 376 aaKnown RBP13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 GNAO1P09471 354 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 MYCNOSP40205 109 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 MTNR1BP49286 362 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 GNG10P50151 68 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 HES1Q14469 280 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 PAN3Q58A45 887 aaKnown RBP13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 ELP2Q6IA86 826 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 PARP16Q8N5Y8 322 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 ACBD7Q8N6N7 88 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 ZNF565Q8N9K5 539 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 CNIH3Q8TBE1 160 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 MRGPRDQ8TDS7 321 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 DPF1Q92782 380 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 WWC2-AS2Q96NR7 200 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 GPR61Q9BZJ8 451 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 NCOR1P1Q9H4R4 102 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 PLCXD1Q9NUJ7 323 aa13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 RPL36Q9Y3U8 105 aaKnown RBP13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 HUWE1Q7Z6Z7 4374 aaKnown RBP13.24□□□□□ -0.29
HDGFL3-203ENST00000563404 DNAH7Q8WXX0 4024 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 A0A1W2PPE3 182 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 SERPINE3A8MV23 424 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 NUDT19A8MXV4 375 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 E9PI62 339 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 FGF16O43320 207 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 ZFPL1O95159 310 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 IGKV1D-33P01593 117 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 IGKV1-33P01594 117 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 IGHG2P01859 326 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 DBTP11182 482 aaKnown RBP13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 C21orf33P30042 268 aaPredicted RBP13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 SSTR5P35346 364 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 MADCAM1Q13477 382 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 PIGYQ3MUY2 71 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 KLHL22Q53GT1 634 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 LHFPL3Q86UP9 236 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 SERPINA12Q8IW75 414 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 KLHL30-AS1Q8NEE0 82 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 OR10K1Q8NGX5 313 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 APH1BQ8WW43 257 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 ALG8Q9BVK2 526 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 ZFP57Q9NU63 452 aa13.23□□□□□ -0.29
HDGFL3-203ENST00000563404 IRGMA1A4Y4 181 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 GABRPO00591 440 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 RAB7AP51149 207 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 PAX5Q02548 391 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 GALEQ14376 348 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 ZNF529Q6P280 563 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 SLC35E3Q7Z769 313 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 OR8H3Q8N146 312 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 STPG2Q8N412 459 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms