RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 HEPN1Q6WQI6 88 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 RBMS3Q6XE24 437 aaKnown RBP6.94□□□□□ -1.3
UBR1-204ENST00000563239 ZNF497Q6ZNH5 498 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 RTN4RL2Q86UN3 420 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 DYNAPQ8N1N2 210 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 GAPTQ8N292 157 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 OR11H6Q8NGC7 330 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 OR6M1Q8NGM8 313 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 DYRK2Q92630 601 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 TAF15Q92804 592 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBR1-204ENST00000563239 FAM46BQ96A09 425 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 SLITRK2Q9H156 845 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 OR51E2Q9H255 320 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 ZNF696Q9H7X3 374 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 PCDHB16Q9NRJ7 776 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 TXNL4BQ9NX01 149 aaKnown RBP6.94□□□□□ -1.3
UBR1-204ENST00000563239 TAS2R3Q9NYW6 316 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 ZNRD1Q9P1U0 126 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 SESN1Q9Y6P5 492 aa6.94□□□□□ -1.3
UBR1-204ENST00000563239 MEIKINA0A087WXM9 373 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 IGHV2-26A0A0B4J1V2 119 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 KBTBD11-OT1A0A1B0GTJ5 212 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 hCG_1809904A0A1W2PP81 198 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 A0A1W2PPE2 198 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 A0A1W2PR64 198 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 A0A1W2PRV1 198 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 FUOMA2VDF0 154 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 ZNF729A6NN14 1252 aaPredicted RBP6.93□□□□□ -1.3
UBR1-204ENST00000563239 FOXI3A8MTJ6 420 aaPredicted RBP6.93□□□□□ -1.3
UBR1-204ENST00000563239 NPIPB11E5RHQ5 1161 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 TRIM77I1YAP6 450 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 LDLRAD4O15165 306 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 CLPXO76031 633 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 BPNT1O95861 308 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 MPIG6BO95866 241 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 MT-ND4P03905 459 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 OMGP23515 440 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 CDK2P24941 298 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 CFPP27918 469 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 CLDN12P56749 244 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 NEDD8Q15843 81 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 ATAD3CQ5T2N8 411 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 ZNF626Q68DY1 528 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 RAB12Q6IQ22 244 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 LHFPL4Q7Z7J7 247 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 TRAPPC6BQ86SZ2 158 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 BEND2Q8NDZ0 799 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 TSPAN14Q8NG11 270 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 OR51D1Q8NGF3 324 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 PIFOQ8TCI5 191 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 NICN1Q9BSH3 213 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 TM2D1Q9BX74 207 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 BARHL1Q9BZE3 327 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 CHIAQ9BZP6 476 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 LPAR5Q9H1C0 372 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 MEGF9Q9H1U4 602 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 TMEM133Q9H2Q1 129 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 RNF167Q9H6Y7 350 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 OR6C3Q9NZP0 311 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 FBLN5Q9UBX5 448 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 STUB1Q9UNE7 303 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 PEX16Q9Y5Y5 336 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 V9GY05 133 aa6.93□□□□□ -1.3
UBR1-204ENST00000563239 A0A087X0M5 115 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 A0A1B0GX30 115 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 TMEM30CPA0ZSE6 113 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 TMEM89A2RUT3 159 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 C15orf65H3BRN8 121 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 PDCD6O75340 191 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 TNFAIP8O95379 198 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 IGLV1-47P01700 117 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 GLAP06280 429 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 FBP1P09467 338 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 ARSBP15848 533 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 CD36P16671 472 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 JUNBP17275 347 aaPredicted RBP6.92□□□□□ -1.3
UBR1-204ENST00000563239 FUT3P21217 361 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 GADD45AP24522 165 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 CHATP28329 748 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 CD34P28906 385 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 SSTR5P35346 364 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 GLP1RP43220 463 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 RAB11BQ15907 218 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 C2orf76Q3KRA6 126 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 FAM53AQ6NSI3 398 aaPredicted RBP6.92□□□□□ -1.3
UBR1-204ENST00000563239 Q6ZPA2 131 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 OR2W3Q7Z3T1 314 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 C5orf24Q7Z6I8 188 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 FAM89BQ8N5H3 189 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 TMEM86BQ8N661 226 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 OR4P4Q8NGL7 312 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 OR13D1Q8NGV5 346 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 SPATA3Q8NHX4 192 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 KCNG3Q8TAE7 436 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 MRGPRDQ8TDS7 321 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 CCDC107Q8WV48 283 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 SSMEM1Q8WWF3 244 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 FAM3DQ96BQ1 224 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 YIPF6Q96EC8 236 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 KIRREL1Q96J84 757 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms