RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 UBE2MP61081 183 aaKnown RBP15.15■□□□□ 0.02
COMMD4-208ENST00000563220 SNRPD2P62316 118 aaKnown RBP15.15■□□□□ 0.02
COMMD4-208ENST00000563220 COL10A1Q03692 680 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 BAMBIQ13145 260 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 FAM201AQ5SY85 155 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 GAPTQ8N292 157 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF808Q8N4W9 903 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-208ENST00000563220 DIRC2Q96SL1 478 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 RTBDNQ9BSG5 229 aaPredicted RBP15.15■□□□□ 0.02
COMMD4-208ENST00000563220 MGAT4AQ9UM21 535 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 WIPI2Q9Y4P8 454 aa15.15■□□□□ 0.02
COMMD4-208ENST00000563220 IGHV3OR15-7A0A075B7D8 119 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 TRAV39A0A0B4J263 110 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 TRDCB7Z8K6 153 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 IFNL4K9M1U5 179 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 PI3P19957 117 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 PRDX2P32119 198 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 THOC7Q6I9Y2 204 aaKnown RBP15.14■□□□□ 0.01
COMMD4-208ENST00000563220 Q8TCH9 128 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 PIK3IP1Q96FE7 263 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 DLL4Q9NR61 685 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 RNF7Q9UBF6 113 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 ANKHD1Q8IWZ3 2542 aaKnown RBP15.14■□□□□ 0.01
COMMD4-208ENST00000563220 IGKV1D-17A0A075B6S4 117 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 AGAP20933 346 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 ZBTB25P24278 435 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 FCGR2CP31995 323 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 DHRS2Q13268 280 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 PPP1R1AQ13522 171 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 HERPUD1Q15011 391 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 FAM90A1Q86YD7 464 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 ERGIC1Q969X5 290 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 TMEM230Q96A57 120 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 TMEM204Q9BSN7 226 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 DECR2Q9NUI1 292 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 DNAJB11Q9UBS4 358 aa15.14■□□□□ 0.01
COMMD4-208ENST00000563220 IGKV1-6A0A0C4DH72 117 aa15.13■□□□□ 0.01
COMMD4-208ENST00000563220 CYB5R3P00387 301 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-208ENST00000563220 PRB1P04280 392 aa15.13■□□□□ 0.01
COMMD4-208ENST00000563220 AKR1C4P17516 323 aa15.13■□□□□ 0.01
COMMD4-208ENST00000563220 NFYAP23511 347 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-208ENST00000563220 EFNB3Q15768 340 aa15.13■□□□□ 0.01
COMMD4-208ENST00000563220 SPICQ8N5J4 248 aa15.13■□□□□ 0.01
COMMD4-208ENST00000563220 OR11H4Q8NGC9 324 aa15.13■□□□□ 0.01
COMMD4-208ENST00000563220 ZNF436Q9C0F3 470 aaPredicted RBP15.13■□□□□ 0.01
COMMD4-208ENST00000563220 SHARPINQ9H0F6 387 aa15.13■□□□□ 0.01
COMMD4-208ENST00000563220 DCAF16Q9NXF7 216 aa15.13■□□□□ 0.01
COMMD4-208ENST00000563220 PPP1R3CQ9UQK1 317 aa15.13■□□□□ 0.01
COMMD4-208ENST00000563220 KIR2DS1A0A191URI9 304 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 CD80P33681 288 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 KIR2DS4P43632 304 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 OR3A1P47881 315 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 SEC61A1P61619 476 aaKnown RBP15.12■□□□□ 0.01
COMMD4-208ENST00000563220 KIR2DS1Q14954 304 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 C2orf68Q2NKX9 166 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 ZNF672Q499Z4 452 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-208ENST00000563220 TMEM185AQ8NFB2 350 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 SCGB3A2Q96PL1 93 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 DHRS9Q9BPW9 319 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 SLC23A1Q9UHI7 598 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 B9A039 149 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 TNFRSF1AP19438 455 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 DHODHQ02127 395 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 AESQ08117 197 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 SURF2Q15527 256 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-208ENST00000563220 FAM209AQ5JX71 171 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 FAHD2BQ6P2I3 314 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-208ENST00000563220 UXS1Q8NBZ7 420 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 FAM222BQ8WU58 562 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 FAHD2AQ96GK7 314 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 SEBOXQ9HB31 216 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-208ENST00000563220 TRAPPC2LQ9UL33 140 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 CACNA1DQ01668 2161 aa15.12■□□□□ 0.01
COMMD4-208ENST00000563220 C9orf170A2RU37 121 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 H7C1Q1 480 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 BET1O15155 118 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 ZNF737O75373 536 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 SNAPC5O75971 98 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 HLA-AP01891 365 aaKnown RBP15.11■□□□□ 0.01
COMMD4-208ENST00000563220 PGAM2P15259 253 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 DNASE1P24855 282 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 GABRA2P47869 451 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 HLA-DRB3P79483 266 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 TESK1Q15569 626 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 SWI5Q1ZZU3 235 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 LYG2Q86SG7 212 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 COQ2Q96H96 371 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 FXYD6Q9H0Q3 95 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 DYNLRB1Q9NP97 96 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 MBNL3Q9NUK0 354 aaKnown RBP15.11■□□□□ 0.01
COMMD4-208ENST00000563220 MGAT4CQ9UBM8 478 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 HCFC1P51610 2035 aa15.11■□□□□ 0.01
COMMD4-208ENST00000563220 PKDREJQ9NTG1 2253 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 POM121CA8CG34 1229 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 AADACP22760 399 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 GLP1RP43220 463 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 FXYD4P59646 89 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 SLC35E4Q6ICL7 350 aa15.1■□□□□ 0.01
COMMD4-208ENST00000563220 C12orf45Q8N5I9 185 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-208ENST00000563220 OR2AK2Q8NG84 335 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms