RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 RDH14Q9HBH5 336 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 KLHDC2Q9Y2U9 406 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 K7EP34 96 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 CD5LO43866 347 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 PTHLHP12272 177 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 CCR2P41597 374 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 FOXG1P55316 489 aaPredicted RBP8.12□□□□□ -1.11
CDH1-205ENST00000562836 UBE2NP61088 152 aaKnown RBP8.12□□□□□ -1.11
CDH1-205ENST00000562836 FUT5Q11128 374 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 BVES-AS1Q5T3Y7 98 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 TMEM184AQ6ZMB5 413 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 SPNS2Q8IVW8 549 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 ARHGEF39Q8N4T4 335 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 OR10G2Q8NGC3 310 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 SOCS4Q8WXH5 440 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 ZNF488Q96MN9 340 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 ABHD6Q9BV23 337 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 NAT8BQ9UHF3 227 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 CYSLTR1Q9Y271 337 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 SIGLEC9Q9Y336 463 aa8.12□□□□□ -1.11
CDH1-205ENST00000562836 A0A087WUU8 490 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 A0A1B0GTI1 187 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 A0A1W2PQH9 124 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 RAB27BO00194 218 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 IGHA1P01876 353 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 NKX2-1P43699 371 aaPredicted RBP8.11□□□□□ -1.11
CDH1-205ENST00000562836 XCR1P46094 333 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 TGFBR3Q03167 851 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 PRDX4Q13162 271 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 CLEC12BQ2HXU8 276 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 ACOT6Q3I5F7 207 aaPredicted RBP8.11□□□□□ -1.11
CDH1-205ENST00000562836 DCAF12Q5T6F0 453 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 MOB1BQ7L9L4 216 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 OR1L8Q8NGR8 309 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 OR4F5Q8NH21 305 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 V9GYY9 64 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 SH2D1BO14796 132 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 LILRA1O75019 489 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 NPIPB7O75200 414 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 ORM1P02763 201 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 HOXB6P17509 224 aaKnown RBP8.11□□□□□ -1.11
CDH1-205ENST00000562836 PSG7Q13046 419 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 CXorf66Q5JRM2 361 aaPredicted RBP8.11□□□□□ -1.11
CDH1-205ENST00000562836 SCCPDHQ8NBX0 429 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 OR6K2Q8NGY2 324 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 SLC25A40Q8TBP6 338 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 AP1S3Q96PC3 154 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 SLC17A9Q9BYT1 436 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 PATZ1Q9HBE1 687 aaKnown RBP8.11□□□□□ -1.11
CDH1-205ENST00000562836 NEUROG3Q9Y4Z2 214 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 TTC3P53804 2025 aa8.11□□□□□ -1.11
CDH1-205ENST00000562836 A0A1W2PQU0 124 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 MED19A0JLT2 244 aaPredicted RBP8.1□□□□□ -1.11
CDH1-205ENST00000562836 EEF1E1-BLOC1S5C9J1V9 151 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 FCN3O75636 299 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 SFT2D2O95562 160 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ISG15P05161 165 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 CD55P08174 381 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 PRDX2P32119 198 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 OPRM1P35372 400 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 RPS15AP62244 130 aaKnown RBP8.1□□□□□ -1.11
CDH1-205ENST00000562836 ADIRFQ15847 76 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.1□□□□□ -1.113e-8■□□□□ 9.9
CDH1-205ENST00000562836 FOXI2Q6ZQN5 318 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 C9orf40Q8IXQ3 194 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ZADH2Q8N4Q0 377 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ZIC4Q8N9L1 334 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 OR51A2Q8NGJ7 313 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 OR2AJ1Q8NGZ0 328 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 WNT10AQ9GZT5 417 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 WDR76Q9H967 626 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 CKAP5Q14008 2032 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 TSPAN11A1L157 253 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 A8MT66 165 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 TGFBR3LH3BV60 316 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 TNFRSF11BO00300 401 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ZNF217O75362 1048 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ATP1B1P05026 303 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 CT45A10P0DMU9 189 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ZNF17P17021 662 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 CD34P28906 385 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 REG1BP48304 166 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 GNG5P63218 68 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 FAM27D1Q5T7N8 215 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 NCBP2-AS2Q69YL0 99 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 CDC42EP5Q6NZY7 148 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 Q6ZSR6 202 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ATOH7Q8N100 152 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.1□□□□□ -1.11
CDH1-205ENST00000562836 OR5AU1Q8NGC0 362 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 ZNRF4Q8WWF5 429 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 OR5P2Q8WZ92 322 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 DPY30Q9C005 99 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 NKX2-4Q9H2Z4 354 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 NOP16Q9Y3C1 178 aaKnown RBP8.1□□□□□ -1.11
CDH1-205ENST00000562836 SCN1AP35498 2009 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 TINCRA0A1B0GVN0 87 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 SDCBPO00560 298 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms