RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 KLK3P07288 261 aaPredicted RBP12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 IGKV1-13P0DP09 117 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 SRFP11831 508 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 NTF4P34130 210 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 TAS2R30P59541 319 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 C4orf17Q53FE4 359 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM180AQ6UWF9 173 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 FGFBP3Q8TAT2 258 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 FAM210BQ96KR6 192 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 FOXB1Q99853 325 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 OR2H1Q9GZK4 316 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 A0A1W2PQM1 296 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 SLC22A20A6NK97 555 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 HLA-HP01893 362 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 TRGC1P0CF51 173 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 FABP4P15090 132 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 SSR4P51571 173 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 IL24Q13007 206 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 MPV17LQ2QL34 196 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 CEACAM16Q2WEN9 425 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 ZNF468Q5VIY5 522 aaPredicted RBP12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 C1orf87Q8N0U7 546 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 HIST3H2BBQ8N257 126 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 CPT1CQ8TCG5 803 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 RHOVQ96L33 236 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 CCDC74BQ96LY2 380 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 WNT5BQ9H1J7 359 aa12.01□□□□□ -0.49
VPS9D1-202ENST00000561976 LOC102723971A0A1B0GUV8 181 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 GJE1A6NN92 205 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 CEACAM1P13688 526 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 MMP9P14780 707 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 BCL3P20749 454 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 YRDCQ86U90 279 aaKnown RBP12□□□□□ -0.49
VPS9D1-202ENST00000561976 OR13D1Q8NGV5 346 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 RNASE11Q8TAA1 199 aaKnown RBP12□□□□□ -0.49
VPS9D1-202ENST00000561976 SF3B5Q9BWJ5 86 aaKnown RBP12□□□□□ -0.49
VPS9D1-202ENST00000561976 PROK2Q9HC23 129 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 Q9N2K0 584 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 TCFL5Q9UL49 500 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 CFAP54Q96N23 3096 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
VPS9D1-202ENST00000561976 DUXBA0A1W2PPF3 345 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 DFFBO76075 338 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 UCP1P25874 307 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 CARD18P57730 90 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 TMEM267Q0VDI3 215 aaPredicted RBP12□□□□□ -0.49
VPS9D1-202ENST00000561976 DPPA3Q6W0C5 159 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 PLPPR1Q8TBJ4 325 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 FRZBQ92765 325 aa12□□□□□ -0.49
VPS9D1-202ENST00000561976 OR5H1A6NKK0 313 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 B4DEV8 164 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 GDF9O60383 454 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 HIST1H1BP16401 226 aaKnown RBP11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 RAC3P60763 192 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 FOXO1Q12778 655 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 DAZAP2Q15038 168 aaPredicted RBP11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 Q3ZCU0 254 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 SP5Q6BEB4 398 aaPredicted RBP11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 MRPL14Q6P1L8 145 aaKnown RBP11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 LCN15Q6UWW0 184 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 PRDM13Q9H4Q3 707 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 OCIAD1Q9NX40 245 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 CLEC18AA5D8T8 446 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 CBR3O75828 277 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 PTBP3O95758 552 aaKnown RBP11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 EDN3P14138 238 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 CCNOP22674 350 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 PAX9P55771 341 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 PCBD1P61457 104 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 CLEC18CQ8NCF0 446 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 ABHD5Q8WTS1 349 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 TECTBQ96PL2 329 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 LRFN1Q9P244 771 aa11.99□□□□□ -0.49
VPS9D1-202ENST00000561976 CLDN34H7C241 214 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 CXCL13O43927 109 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 GAMTQ14353 236 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 HERPUD1Q15011 391 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 ZNF787Q6DD87 383 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 C17orf78Q8N4C9 275 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 RSG1Q9BU20 258 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 ZNF665Q9H7R5 613 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 TAAR3PQ9P1P4 343 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 IGHV1-45A0A0A0MS14 117 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 ZNHIT1O43257 154 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 S100GP29377 79 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 FGF8P55075 233 aaPredicted RBP11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 CLDN15P56746 228 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 H1FOOQ8IZA3 346 aaPredicted RBP11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 OR5D13Q8NGL4 314 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 OR51H1Q8NH63 302 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 IL36RNQ9UBH0 155 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 RNF115Q9Y4L5 304 aa11.98□□□□□ -0.49
VPS9D1-202ENST00000561976 KIR2DS1A0A191URI9 304 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 PGLYRP1O75594 196 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 IGHV3-9P01782 118 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 KIR2DS4P43632 304 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 KIR2DS1Q14954 304 aa11.97□□□□□ -0.49
VPS9D1-202ENST00000561976 OR8G1Q15617 311 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms