RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-205	ENST00000561945		J3QLW9	94 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	TMEM225B	P0DP42	221 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	ZNF19	P17023	458 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	NFYB	P25208	207 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	RBM39	Q14498	530 aa	Known RBP	11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	PAN3	Q58A45	887 aa	Known RBP	11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	DEFB121	Q5J5C9	76 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	NHLRC3	Q5JS37	347 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	KHDC1L	Q5JSQ8	128 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	C9orf152	Q5JTZ5	239 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	ZNF329	Q86UD4	541 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945		Q8N6K4	173 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	RNF152	Q8N8N0	203 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	C8orf31	Q8N9H6	132 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	PLPPR1	Q8TBJ4	325 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	DPF1	Q92782	380 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	CPNE2	Q96FN4	548 aa	Predicted RBP	11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	NOL4L	Q96MY1	436 aa	Predicted RBP	11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	ALG8	Q9BVK2	526 aa		11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	ISG20L2	Q9H9L3	353 aa	Known RBP	11.47	□□□□□ -0.57
SPG7-205	ENST00000561945	SAC3D1	A6NKF1	404 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	GABRP	O00591	440 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	HCK	P08631	526 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	TMEM11	P17152	192 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	GLP1R	P43220	463 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	KLHL22	Q53GT1	634 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	C18orf65	Q6ZTR6	163 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	TGIF2LX	Q8IUE1	241 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	IZUMO1	Q8IYV9	350 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	STPG2	Q8N412	459 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	LINC00311	Q8N616	119 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	OR52M1	Q8NGK5	317 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	MRPL48	Q96GC5	212 aa	Known RBP	11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	WWC2-AS2	Q96NR7	200 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	MRPS18A	Q9NVS2	196 aa	Known RBP	11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	ERVK13-1	Q9NX77	482 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	IL36G	Q9NZH8	169 aa		11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	ZMAT5	Q9UDW3	170 aa	Known RBP	11.46	□□□□□ -0.57
SPG7-205	ENST00000561945	SERPINE3	A8MV23	424 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945		E9PI62	339 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	IGKV1D-33	P01593	117 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	IGKV1-33	P01594	117 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	CCDC159	P0C7I6	412 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	SSTR5	P35346	364 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	ALDH3A2	P51648	485 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	GP2	P55259	537 aa	Known RBP	11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	SLC35B1	P78383	322 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	RAB40B	Q12829	278 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945		Q3ZCU0	254 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	C8orf86	Q6ZUL3	223 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	SLC35E3	Q7Z769	313 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	LHFPL3	Q86UP9	236 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	ZNF695	Q8IW36	515 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	FOXRED2	Q8IWF2	684 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	TMEM104	Q8NE00	496 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	OR5AK2	Q8NH90	309 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	PYDC1	Q8WXC3	89 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	LEAP2	Q969E1	77 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	ST6GALNAC6	Q969X2	333 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	JAM3	Q9BX67	310 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	LIN7C	Q9NUP9	197 aa	Known RBP	11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	ING3	Q9NXR8	418 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	ZNF580	Q9UK33	172 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	DHDH	Q9UQ10	334 aa		11.45	□□□□□ -0.58
SPG7-205	ENST00000561945	IGHV1-3	A0A0C4DH29	117 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	C15orf65	H3BRN8	121 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	HSPB6	O14558	160 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	EI24	O14681	340 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	HSD17B6	O14756	317 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	RAMP3	O60896	148 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	RAB3A	P20336	220 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	GZMH	P20718	246 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	CD69	Q07108	199 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	PIGY	Q3MUY2	71 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	OR51A2	Q8NGJ7	313 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	RHOXF1	Q8NHV9	184 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	MRGPRD	Q8TDS7	321 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	RGP1	Q92546	391 aa	Predicted RBP	11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	EAF1	Q96JC9	268 aa	Predicted RBP	11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	DPCD	Q9BVM2	203 aa	Predicted RBP	11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	ABCG5	Q9H222	651 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	LSM4	Q9Y4Z0	139 aa	Known RBP	11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	ORC6	Q9Y5N6	252 aa		11.44	□□□□□ -0.58
SPG7-205	ENST00000561945	DNAH7	Q8WXX0	4024 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	LINC01548	A6NM66	108 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945		H3BNX3	289 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	AP4M1	O00189	453 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	CCRL2	O00421	344 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	MPZL2	O60487	215 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	FADS2	O95864	444 aa	Known RBP	11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	IGHV3-7	P01780	117 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	GAPDH	P04406	335 aa	Known RBP	11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	NHLRC4	P0CG21	123 aa	Predicted RBP	11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	VSIG8	P0DPA2	414 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	CFHR3	Q02985	330 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	HES1	Q14469	280 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	ZSCAN26	Q16670	478 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	TEX38	Q6PEX7	206 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945	LINC00596	Q86U02	117 aa		11.43	□□□□□ -0.58
SPG7-205	ENST00000561945		Q8N9W7	124 aa		11.43	□□□□□ -0.58

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