RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 SPHARQ15513 63 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 UTF1Q5T230 341 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 SUMF2Q8NBJ7 301 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 OR4D6Q8NGJ1 314 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 ZNF596Q8TC21 504 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 MRPS24Q96EL2 167 aaKnown RBP16.63■□□□□ 0.25
TPM1-232ENST00000561425 KIRREL1Q96J84 757 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 DPCDQ9BVM2 203 aaPredicted RBP16.63■□□□□ 0.25
TPM1-232ENST00000561425 ZNF286AQ9HBT8 521 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 MEIKINA0A087WXM9 373 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 A0A1W2PP11 408 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 HSPB6O14558 160 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 SC5DO75845 299 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 GTF2F2P13984 249 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 JUNBP17275 347 aaPredicted RBP16.62■□□□□ 0.25
TPM1-232ENST00000561425 SERPINA2P20848 420 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 GABRA5P31644 462 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 C11orf88Q6PI97 169 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 BRICD5Q6PL45 260 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 DTX3Q8N9I9 347 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 OR10A7Q8NGE5 316 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 S100A13Q99584 98 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 RCC2Q9P258 522 aaKnown RBP16.62■□□□□ 0.25
TPM1-232ENST00000561425 HILPDAQ9Y5L2 63 aa16.62■□□□□ 0.25
TPM1-232ENST00000561425 OR7C1O76099 320 aaPredicted RBP16.61■□□□□ 0.25
TPM1-232ENST00000561425 MAPK3P27361 379 aaPredicted RBP16.61■□□□□ 0.25
TPM1-232ENST00000561425 HLA-DRB5Q30154 266 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 SLC22A6Q4U2R8 563 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 ACSM3Q53FZ2 586 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 GLIPR1L1Q6UWM5 242 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 TREML4Q6UXN2 200 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 OR4C13Q8NGP0 309 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 MUL1Q969V5 352 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 CREB3L1Q96BA8 519 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 UQCC2Q9BRT2 126 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 YTHDF1Q9BYJ9 559 aaKnown RBP16.61■□□□□ 0.25
TPM1-232ENST00000561425 NPFFR1Q9GZQ6 430 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 ABCB10Q9NRK6 738 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 ING3Q9NXR8 418 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 CALYQ9NYX4 217 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 PITPNC1Q9UKF7 332 aa16.61■□□□□ 0.25
TPM1-232ENST00000561425 MRPS28Q9Y2Q9 187 aaKnown RBP16.61■□□□□ 0.25
TPM1-232ENST00000561425 LEUTXA8MZ59 168 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 BUB1B-PAK6H3BSN5 160 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 IL1AP01583 271 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 MAS1P04201 325 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 CRHBPP24387 322 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 INSL4Q14641 139 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 PLA1AQ53H76 456 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 SLC16A12Q6ZSM3 486 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 NKAIN3Q8N8D7 197 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 NDNFQ8TB73 568 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 ZNF702PQ9H963 129 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 IDI2-AS1Q9NZ38 188 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 SIGLEC9Q9Y336 463 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 MGAM2Q2M2H8 2515 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 KIAA2026Q5HYC2 2103 aa16.6■□□□□ 0.25
TPM1-232ENST00000561425 TIMM23O14925 209 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 GZMHP20718 246 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 PRRX1P54821 245 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 TPBGQ13641 420 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 LRRTM1Q86UE6 522 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 GAPTQ8N292 157 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 JAGN1Q8N5M9 183 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 OR9G1Q8NH87 305 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 PHYHIPQ92561 330 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 ISYNA1Q9NPH2 558 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 SERTAD4Q9NUC0 356 aa16.59■□□□□ 0.25
TPM1-232ENST00000561425 FAM90A10PA6NDY2 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A18PA6NE21 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A16PA6NEW6 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A20PA6NIJ5 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A7PA6NKC0 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A12PA8MX19 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A5PA8MXJ8 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A23PA8MXZ1 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 OOSP1A8MZH6 123 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 C15orf65H3BRN8 121 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 MT-ND4P03905 459 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A15PP0C7V4 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A13PP0C7W8 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A14PP0C7W9 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 FAM90A24PP0C7X0 464 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 GLP1RP43220 463 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 GABARAPL2P60520 117 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 TPTE2P1Q5T6R2 138 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 ZNF497Q6ZNH5 498 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 MRGPRDQ8TDS7 321 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 WIPF2Q8TF74 440 aaPredicted RBP16.58■□□□□ 0.24
TPM1-232ENST00000561425 CFHR4Q92496 578 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 SPACA1Q9HBV2 294 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 TCF7L1Q9HCS4 588 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 GHRLQ9UBU3 117 aa16.58■□□□□ 0.24
TPM1-232ENST00000561425 TMEM30CPA0ZSE6 113 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 FAM172BPA6NC97 362 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 J3QR06 171 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 TOR1AO14656 332 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 MED22Q15528 200 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 C1orf100Q5SVJ3 147 aa16.57■□□□□ 0.24
TPM1-232ENST00000561425 FAM27D1Q5T7N8 215 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms