RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PFN1P07737 140 aaKnown RBP14.21□□□□□ -0.13
TPM1-228ENST00000560975 GALR1P47211 349 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 SRPXP78539 464 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 DLX2Q07687 328 aaPredicted RBP14.21□□□□□ -0.13
TPM1-228ENST00000560975 BAXQ07812 192 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 ENDOGQ14249 297 aaKnown RBP14.21□□□□□ -0.13
TPM1-228ENST00000560975 PLPPR5Q32ZL2 321 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 SLC25A26Q70HW3 274 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 OSR2Q8N2R0 312 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 PLPPR1Q8TBJ4 325 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 OXGR1Q96P68 337 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 Q9N2K0 584 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 IGHV3-15A0A0B4J1V0 119 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 FGF5P12034 268 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 GABRG2P18507 467 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 CTHP32929 405 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 NUBP1P53384 320 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 ELLP55199 621 aaPredicted RBP14.21□□□□□ -0.13
TPM1-228ENST00000560975 GNB2P62879 340 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 ID3Q02535 119 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 IL24Q13007 206 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 EXT1Q16394 746 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 KCNMB1Q16558 191 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 GPR137CQ8N3F9 429 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 CDCA3Q99618 268 aaPredicted RBP14.21□□□□□ -0.13
TPM1-228ENST00000560975 CTDSP1Q9GZU7 261 aa14.21□□□□□ -0.13
TPM1-228ENST00000560975 TRIOO75962 3097 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 HMGB3O15347 200 aaKnown RBP14.2□□□□□ -0.14
TPM1-228ENST00000560975 RELQ04864 619 aaPredicted RBP14.2□□□□□ -0.14
TPM1-228ENST00000560975 MALLQ13021 153 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 DEFB119Q8N690 84 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 SCGB1C1Q8TD33 95 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 DNASE2BQ8WZ79 361 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 TMEM56Q96MV1 263 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 PLA2G3Q9NZ20 509 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 TMEM56-RWDD3S4R434 201 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 CFAP54Q96N23 3096 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 H7BYZ3 331 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 CTSSP25774 331 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 RPL29P47914 159 aaKnown RBP14.2□□□□□ -0.14
TPM1-228ENST00000560975 EIF3IQ13347 325 aaKnown RBP14.2□□□□□ -0.14
TPM1-228ENST00000560975 FAM69BQ5VUD6 431 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 DPPA3Q6W0C5 159 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 OR5T1Q8NG75 326 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 TMEM18Q96B42 140 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 PRSS50Q9UI38 385 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 FER1L5A0AVI2 2057 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 TRAV1-1A0A0B4J248 108 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 TLX3O43711 291 aaPredicted RBP14.2□□□□□ -0.14
TPM1-228ENST00000560975 HIST3H3Q16695 136 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 DEFB133Q30KQ1 61 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 NMSQ5H8A3 153 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 TMEM240Q5SV17 173 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 OR2V1Q8NHB1 315 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 KLHDC7BQ96G42 594 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 MRGPRX4Q96LA9 322 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 OR5B12Q96R08 314 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 PLK3Q9H4B4 646 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 METTL7AQ9H8H3 244 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 VAX2Q9UIW0 290 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 MTCH2Q9Y6C9 303 aa14.2□□□□□ -0.14
TPM1-228ENST00000560975 ATG2AQ2TAZ0 1938 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 IGKV1D-13A0A0B4J2D9 117 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 IGKV1-13P0DP09 117 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 TDGF1P3P51864 188 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 BTNL3Q6UXE8 466 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 CCL28Q9NRJ3 127 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 TAAR3PQ9P1P4 343 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 A0A0G2JRQ6 117 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 IAPPP10997 89 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 BLKP51451 505 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 SUMO3P55854 103 aaPredicted RBP14.19□□□□□ -0.14
TPM1-228ENST00000560975 RAB35Q15286 201 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 TESK1Q15569 626 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 IQCJQ1A5X6 159 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 BSXQ3C1V8 233 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 MAML2Q8IZL2 1156 aaPredicted RBP14.19□□□□□ -0.14
TPM1-228ENST00000560975 OR10G3Q8NGC4 313 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 NAT8Q9UHE5 227 aa14.19□□□□□ -0.14
TPM1-228ENST00000560975 LRRC3CA6NJW4 275 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 ETV2O00321 342 aaPredicted RBP14.18□□□□□ -0.14
TPM1-228ENST00000560975 HSPB6O14558 160 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 CA3P07451 260 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 VDAC1P21796 283 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 FASLGP48023 281 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 HERPUD1Q15011 391 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 TMEM241Q24JQ0 296 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 ZNF705AQ6ZN79 300 aaPredicted RBP14.18□□□□□ -0.14
TPM1-228ENST00000560975 OR51G1Q8NGK1 321 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 SPSB1Q96BD6 273 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 ZNF837Q96EG3 531 aaPredicted RBP14.18□□□□□ -0.14
TPM1-228ENST00000560975 A0A1B0GUS0 222 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 MARCH11A6NNE9 402 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 C5orf67F2Z3F1 127 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 PDCD6O75340 191 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 LCATP04180 440 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 SCTP09683 121 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 NPSP0C0P6 89 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 METTL15P1P0C7V9 234 aa14.18□□□□□ -0.14
TPM1-228ENST00000560975 ERVFC1-1P60608 527 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms