RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 MOB1BQ7L9L4 216 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 C5orf24Q7Z6I8 188 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 NEK7Q8TDX7 302 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 PRRT1Q99946 306 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 CABLES2Q9BTV7 478 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 DNTTIP1Q9H147 329 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 NCOR1P1Q9H4R4 102 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 PLEKHF2Q9H8W4 249 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 ZNF221Q9UK13 617 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 FLVCR2Q9UPI3 526 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 MAST4O15021 2626 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 TRAV6A0A075B6T7 132 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 PPIAL4EA0A075B759 164 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 A0A1B0GW55 424 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 TMEM30CPA0ZSE6 113 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 TRDCB7Z8K6 153 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 PPIAL4DF5H284 164 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 OVOL3O00110 214 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 SIGLEC5O15389 551 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 FABP7O15540 132 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 ZNF205O95201 554 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 H2AFB2P0C5Z0 115 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 DUX4L2P0CJ85 424 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 DUX4L3P0CJ86 424 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 DUX4L4P0CJ87 422 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 DUX4L5P0CJ88 424 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 DUX4L6P0CJ89 424 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 DUX4L7P0CJ90 424 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 PPIAL4FP0DN26 164 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 SELLP14151 372 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 IRF2P14316 349 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 RCC1P18754 421 aaPredicted RBP9.41□□□□□ -0.9
SNX1-212ENST00000560861 COL8A2P25067 703 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 HLA-DRB3P79483 266 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 CHRFAM7AQ494W8 412 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 AADACL3Q5VUY0 350 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 DUX4L9Q6RFH8 374 aaPredicted RBP9.41□□□□□ -0.9
SNX1-212ENST00000560861 DHRS11Q6UWP2 260 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 IDO2Q6ZQW0 420 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 SLC36A1Q7Z2H8 476 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 PEG10Q86TG7 708 aaKnown RBP9.41□□□□□ -0.9
SNX1-212ENST00000560861 C1orf87Q8N0U7 546 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 NEU4Q8WWR8 484 aaPredicted RBP9.41□□□□□ -0.9
SNX1-212ENST00000560861 SLC25A21Q9BQT8 299 aaPredicted RBP9.41□□□□□ -0.9
SNX1-212ENST00000560861 CHMP1AQ9HD42 196 aaPredicted RBP9.41□□□□□ -0.9
SNX1-212ENST00000560861 MYOZ1Q9NP98 299 aaPredicted RBP9.41□□□□□ -0.9
SNX1-212ENST00000560861 EHFQ9NZC4 300 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 DUX4Q9UBX2 424 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 KIF25Q9UIL4 384 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 SCP2D1Q9UJQ7 156 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 PPIAL4AQ9Y536 164 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 SPG11Q96JI7 2443 aa9.41□□□□□ -0.9
SNX1-212ENST00000560861 KIR2DS1A0A191URI9 304 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 OR5H14A6NHG9 310 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 NPIPB11E5RHQ5 1161 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 SDCBPO00560 298 aaPredicted RBP9.4□□□□□ -0.9
SNX1-212ENST00000560861 MGST3O14880 152 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 ARPC1BO15143 372 aaKnown RBP9.4□□□□□ -0.9
SNX1-212ENST00000560861 PEX14O75381 377 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 TUSC2O75896 110 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 GYPAP02724 150 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 SCTP09683 121 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 VSIG10L2P0DP72 767 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 KIR2DS4P43632 304 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 GABRA2P47869 451 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 OR3A3P47888 321 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 AESQ08117 197 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 KIR2DS1Q14954 304 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 TATDN3Q17R31 274 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 CR1LQ2VPA4 569 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 ZNF561Q8N587 486 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 ZDHHC22Q8N966 263 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 DEFB108BQ8NET1 73 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 TERB2Q8NHR7 220 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 CCL17Q92583 94 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 CCL13Q99616 98 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 VRK1Q99986 396 aaPredicted RBP9.4□□□□□ -0.9
SNX1-212ENST00000560861 GINS4Q9BRT9 223 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 RAB1BQ9H0U4 201 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 FAM234AQ9H0X4 552 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 GHITMQ9H3K2 345 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 UBTD1Q9HAC8 227 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 KAAG1Q9UBP8 84 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 LAMP3Q9UQV4 416 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 VSIG4Q9Y279 399 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 ALG5Q9Y673 324 aa9.4□□□□□ -0.9
SNX1-212ENST00000560861 NAV2Q8IVL1 2488 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 TRAV39A0A0B4J263 110 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 TRAV38-1A0A0B4J264 116 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 LYNX1G3V0Z9 82 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 DIRAS3O95661 229 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 IGHV2-70P01814 119 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 TK1P04183 234 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 IL5P05113 134 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 OR5H8P0DN80 308 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 CGB3P0DN86 165 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 CGB7P0DN87 165 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 LYNX1P0DP58 116 aa9.39□□□□□ -0.91
SNX1-212ENST00000560861 ERP29P30040 261 aaKnown RBP9.39□□□□□ -0.91
SNX1-212ENST00000560861 GLIPR1P48060 266 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms