RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ASCC1Q8N9N2 400 aaKnown RBP10.86□□□□□ -0.67
SNX1-211ENST00000560829 LILRB4Q8NHJ6 448 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 GRPEL2Q8TAA5 225 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 TOMM40LQ969M1 308 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 ERGIC1Q969X5 290 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 GALNT14Q96FL9 552 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 COQ3Q9NZJ6 369 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 OR14J1Q9UGF5 321 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 MED19A0JLT2 244 aaPredicted RBP10.85□□□□□ -0.67
SNX1-211ENST00000560829 HMSDA8MTL9 139 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 IFNA2P01563 188 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 PIGPP57054 158 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 FXYD4P59646 89 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 SLC9A3R2Q15599 337 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 LGALSLQ3ZCW2 172 aaPredicted RBP10.85□□□□□ -0.67
SNX1-211ENST00000560829 SLC35E4Q6ICL7 350 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 KCTD9Q7L273 389 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 ITLN1Q8WWA0 313 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 DIRC2Q96SL1 478 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 ESRP2Q9H6T0 727 aaKnown RBP10.85□□□□□ -0.67
SNX1-211ENST00000560829 PRR14LQ5THK1 2151 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 RFPL4AA6NLU0 287 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 RFPL4AL1F8VTS6 287 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 CCSO14618 274 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 BET1O15155 118 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 CD55P08174 381 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 OR4A8P0C604 315 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 EGR1P18146 543 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 CEBPDP49716 269 aaPredicted RBP10.85□□□□□ -0.67
SNX1-211ENST00000560829 SNRPD2P62316 118 aaKnown RBP10.85□□□□□ -0.67
SNX1-211ENST00000560829 SORDQ00796 357 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 FGL1Q08830 312 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 ATXN7L3Q14CW9 347 aaPredicted RBP10.85□□□□□ -0.67
SNX1-211ENST00000560829 HMGN3Q15651 99 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 SPRNQ5BIV9 151 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 C5orf24Q7Z6I8 188 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 MOGAT3Q86VF5 341 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 OR5T2Q8NGG2 359 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 Q8TCH9 128 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 RTN4IP1Q8WWV3 396 aaPredicted RBP10.85□□□□□ -0.67
SNX1-211ENST00000560829 FAM122AQ96E09 287 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 NAA60Q9H7X0 242 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 SLC2A9Q9NRM0 540 aa10.85□□□□□ -0.67
SNX1-211ENST00000560829 RP1L1Q8IWN7 2480 aaPredicted RBP10.85□□□□□ -0.67
SNX1-211ENST00000560829 TRAV14DV4A0A0A6YYC5 116 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 TMEM30CPA0ZSE6 113 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 VSTM5A8MXK1 200 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 ATXN7O15265 892 aaPredicted RBP10.84□□□□□ -0.67
SNX1-211ENST00000560829 TNFSF4P23510 183 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 RND3P61587 244 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 TNFAIP6P98066 277 aaPredicted RBP10.84□□□□□ -0.67
SNX1-211ENST00000560829 HOXA4Q00056 320 aaPredicted RBP10.84□□□□□ -0.67
SNX1-211ENST00000560829 ABCA11PQ4W5N1 156 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 DMRTC2Q8IXT2 367 aaPredicted RBP10.84□□□□□ -0.67
SNX1-211ENST00000560829 H1FOOQ8IZA3 346 aaPredicted RBP10.84□□□□□ -0.67
SNX1-211ENST00000560829 FAM185AQ8N0U4 392 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 PDCD10Q9BUL8 212 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 TRAPPC2LQ9UL33 140 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 ZGRF1Q86YA3 2104 aa10.84□□□□□ -0.67
SNX1-211ENST00000560829 TEX13DA0A0J9YY54 714 aaPredicted RBP10.83□□□□□ -0.68
SNX1-211ENST00000560829 FAM90A27PA6NNH2 459 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 SHISA9B4DS77 424 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 PSG2P11465 335 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 GNRHRP30968 328 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 PRDX2P32119 198 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 SERPINF1P36955 418 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 RBMXP38159 391 aaKnown RBP10.83□□□□□ -0.68
SNX1-211ENST00000560829 PLA2G5P39877 138 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 OR3A1P47881 315 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 CYCSP99999 105 aaKnown RBP10.83□□□□□ -0.68
SNX1-211ENST00000560829 COL10A1Q03692 680 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 ADAM5Q6NVV9 412 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 GSG1LQ6UXU4 331 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 LDLRAD3Q86YD5 345 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 CD177Q8N6Q3 437 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 CCDC71LQ8N9Z2 235 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 LILRB1Q8NHL6 650 aaPredicted RBP10.83□□□□□ -0.68
SNX1-211ENST00000560829 FAM222BQ8WU58 562 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 LRRC46Q96FV0 321 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 COQ2Q96H96 371 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 NMES1Q9C002 83 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 SHARPINQ9H0F6 387 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 GCM1Q9NP62 436 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 NDRG3Q9UGV2 375 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 KCNIP3Q9Y2W7 256 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 POLEQ07864 2286 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 IGKV1D-17A0A075B6S4 117 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 ZNF737O75373 536 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 TMEM65Q6PI78 240 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 LRTM2Q8N967 370 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 OR10J5Q8NHC4 309 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 SEC22AQ96IW7 307 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 KIRREL1Q96J84 757 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 VRK1Q99986 396 aaPredicted RBP10.83□□□□□ -0.68
SNX1-211ENST00000560829 SUCNR1Q9BXA5 334 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 RNF7Q9UBF6 113 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 OR2W1Q9Y3N9 320 aa10.83□□□□□ -0.68
SNX1-211ENST00000560829 IGKV1D-13A0A0B4J2D9 117 aa10.82□□□□□ -0.68
SNX1-211ENST00000560829 C17orf100A8MU93 164 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms