RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 UBE2QL1A1L167 161 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 TMEM89A2RUT3 159 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 OR2H2O95918 312 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 IFNA6P05013 189 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 IL7P13232 177 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 CHATP28329 748 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 PDCD1Q15116 288 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 ZNF79Q15937 498 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 RNASE12Q5GAN4 147 aaKnown RBP9.81□□□□□ -0.84
LDLR-212ENST00000560467 C1orf229Q6ZS94 237 aaPredicted RBP9.81□□□□□ -0.84
LDLR-212ENST00000560467 ZNF561Q8N587 486 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 SUMF2Q8NBJ7 301 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 OR52I2Q8NH67 350 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 SETD6Q8TBK2 473 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 ZNF418Q8TF45 676 aaPredicted RBP9.81□□□□□ -0.84
LDLR-212ENST00000560467 DNTTIP1Q9H147 329 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 WDR13Q9H1Z4 485 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 ZNF665Q9H7R5 613 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 RAB9BQ9NP90 201 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 KCNIP1Q9NZI2 227 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 ZNF107Q9UII5 783 aaPredicted RBP9.81□□□□□ -0.84
LDLR-212ENST00000560467 PCDHB10Q9UN67 800 aa9.81□□□□□ -0.84
LDLR-212ENST00000560467 LOC105371242A0A075B767 164 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 MFNGO00587 321 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 PPIHO43447 177 aaKnown RBP9.8□□□□□ -0.84
LDLR-212ENST00000560467 FSTL3O95633 263 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 AVPP01185 164 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 PSG2P11465 335 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 EPHA1P21709 976 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 DTYMKP23919 212 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 LMO1P25800 156 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 CD80P33681 288 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 GDNFP39905 211 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 OR3A3P47888 321 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 TMEM50BP56557 158 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 TAS2R19P59542 299 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 HILS1P60008 231 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 BTG1P62324 171 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 IL13RA1P78552 427 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 DGCR2P98153 550 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 ACTBL2Q562R1 376 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 PLAC9Q5JTB6 97 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 TEX36Q5VZQ5 186 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 FAHD2BQ6P2I3 314 aaPredicted RBP9.8□□□□□ -0.84
LDLR-212ENST00000560467 GDPD3Q7L5L3 318 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 NLRC3Q7RTR2 1065 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 SPICQ8N5J4 248 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 OR5T2Q8NGG2 359 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 SGMS2Q8NHU3 365 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 FAM216AQ8WUB2 273 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 SEH1LQ96EE3 360 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 FAHD2AQ96GK7 314 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 SNX22Q96L94 193 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 C7orf50Q9BRJ6 194 aaKnown RBP9.8□□□□□ -0.84
LDLR-212ENST00000560467 ST6GALNAC5Q9BVH7 336 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 FAM234AQ9H0X4 552 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 RCC2Q9P258 522 aaKnown RBP9.8□□□□□ -0.84
LDLR-212ENST00000560467 MTFP1Q9UDX5 166 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 AK3Q9UIJ7 227 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 TRAPPC2LQ9UL33 140 aa9.8□□□□□ -0.84
LDLR-212ENST00000560467 IGHV3OR15-7A0A075B7D8 119 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 A0A0A6YYD4 124 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 KIR2DS1A0A191URI9 304 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 LINC00854A0A1B0GVQ3 168 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 TMEM30CPA0ZSE6 113 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 NAP1L6A6NFF2 107 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 ZNF736B4DX44 427 aaPredicted RBP9.79□□□□□ -0.84
LDLR-212ENST00000560467 HSPB6O14558 160 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 MGST3O14880 152 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 TMPRSS2O15393 492 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 NDUFB3O43676 98 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 ORC5O43913 435 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 RP2O75695 350 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 AMY2BP19961 511 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 TBPP20226 339 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 KIR2DS4P43632 304 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 TAS2R46P59540 309 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 ARPC4P59998 168 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 LMO4P61968 165 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 COL10A1Q03692 680 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 SCGB2A2Q13296 93 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 MEF2DQ14814 521 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 KIR2DS1Q14954 304 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 GRK1Q15835 563 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 RGS21Q2M5E4 152 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 LRRC10Q5BKY1 277 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 Q6P435 159 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 BRICD5Q6PL45 260 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 MOB1BQ7L9L4 216 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 TMEM17Q86X19 198 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 BPIFB2Q8N4F0 458 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 ZNF565Q8N9K5 539 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 POC5Q8NA72 575 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 GPX8Q8TED1 209 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 ST8SIA4Q92187 359 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 SULT4A1Q9BR01 284 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 OCSTAMPQ9BR26 566 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 ZNF286AQ9HBT8 521 aa9.79□□□□□ -0.84
LDLR-212ENST00000560467 TRAV24A0A0B4J272 114 aa9.78□□□□□ -0.84
LDLR-212ENST00000560467 A0A1W2PQ09 198 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms