RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 GSTZ1O43708 216 aaPredicted RBP11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 PFDN1O60925 122 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 TPPPO94811 219 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 HTR3BO95264 441 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 BPNT1O95861 308 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 MMP9P14780 707 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 ZNF44P15621 663 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 GABRR1P24046 479 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 FPR2P25090 351 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 MNDAP41218 407 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 RBM11P57052 281 aaKnown RBP11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 PITPNAQ00169 270 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 PLA2G7Q13093 441 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 RAB11BQ15907 218 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 KRTAP21-3Q3LHN1 58 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 NCR3LG1Q68D85 454 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 GLIPR1L1Q6UWM5 242 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 C17orf107Q6ZR85 190 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 C1orf229Q6ZS94 237 aaPredicted RBP11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 RNF144BQ7Z419 303 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 PPP1R14BQ96C90 147 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 NEDD4LQ96PU5 975 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 THAP7Q9BT49 309 aaPredicted RBP11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 SIRPDQ9H106 197 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 METTL8Q9H825 291 aaKnown RBP11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 ST3GAL6Q9Y274 331 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 ARHGAP32A7KAX9 2087 aa11.53□□□□□ -0.56
PKNOX1-209ENST00000560448 hADV38S2A0JD32 116 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 DEGS1O15121 323 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 PSPNO60542 156 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 AVPP01185 164 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 SERPINA2P20848 420 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 HTR2CP28335 458 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 CEBPDP49716 269 aaPredicted RBP11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 GUCA2AQ02747 115 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 GRK1Q15835 563 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 FAM189A2Q15884 450 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 C2orf76Q3KRA6 126 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 SLC22A6Q4U2R8 563 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 GPR157Q5UAW9 335 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 HACD4Q5VWC8 232 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 Q6P435 159 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 CADM3Q8N126 398 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 BATF2Q8N1L9 274 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 OR51D1Q8NGF3 324 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 FAM3DQ96BQ1 224 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 RHBDL2Q9NX52 303 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 LINC00312Q9Y6C7 94 aa11.52□□□□□ -0.56
PKNOX1-209ENST00000560448 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 LINC00854A0A1B0GVQ3 168 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 TMEM82A0PJX8 343 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 SLC33A1O00400 549 aaPredicted RBP11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 LDLRAD4O15165 306 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 GLAP06280 429 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 EPHA1P21709 976 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 DGCR2P98153 550 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 OR4D6Q8NGJ1 314 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 KCNG3Q8TAE7 436 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 S100A16Q96FQ6 103 aaKnown RBP11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 ONECUT1Q9UBC0 465 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 IL36RNQ9UBH0 155 aa11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 UBE2J1Q9Y385 318 aaPredicted RBP11.52□□□□□ -0.57
PKNOX1-209ENST00000560448 TMEM272A0A1B0GTI8 110 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 OR7C1O76099 320 aaPredicted RBP11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 PRTN3P24158 256 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 CDK2P24941 298 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 DUSP1P28562 367 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 OR3A1P47881 315 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 EFNB2P52799 333 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 P2RX3P56373 397 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 EDDM3BP56851 147 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 ARF6P62330 175 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 RBM39Q14498 530 aaKnown RBP11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 IL17RELQ6ZVW7 336 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 OR2W3Q7Z3T1 314 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 IZUMO1Q8IYV9 350 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 FAM185AQ8N0U4 392 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 SMIM4Q8WVI0 70 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 C1orf147Q96MC9 270 aaPredicted RBP11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 JMJD8Q96S16 334 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 NEURL2Q9BR09 285 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 PCGF1Q9BSM1 259 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 C19orf12Q9NSK7 152 aa11.51□□□□□ -0.57
PKNOX1-209ENST00000560448 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 SIRPB1O00241 398 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 LYRM1O43325 122 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 CA11O75493 328 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 TFF1P04155 84 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 MGMTP16455 207 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 SNU13P55769 128 aaKnown RBP11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 PIGYQ3MUY2 71 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 PAN3Q58A45 887 aaKnown RBP11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 TMEM200BQ69YZ2 307 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 FGFRL1Q8N441 504 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 BPIFB2Q8N4F0 458 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 DUSP18Q8NEJ0 188 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 OR4S1Q8NGB4 309 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 OR10K1Q8NGX5 313 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 ZNF418Q8TF45 676 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms