RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RFESDQ8TAC1 157 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 MRGPRDQ8TDS7 321 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 KIRREL1Q96J84 757 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 S100A13Q99584 98 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 BARHL1Q9BZE3 327 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 BANF2Q9H503 90 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 ZNF696Q9H7X3 374 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 IFT22Q9H7X7 185 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 CALYQ9NYX4 217 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 TCF19Q9Y242 345 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 TPRKBQ9Y3C4 175 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 MINOS1-NBL1R4GNA1 71 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 RGS10O43665 173 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 ATP6V1G2O95670 118 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 GTF2F2P13984 249 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 CD24P25063 80 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 GABRA5P31644 462 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 SSTR5P35346 364 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 MAP2K4P45985 399 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 PAX5Q02548 391 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 HABP2Q14520 560 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 LTC4SQ16873 150 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 ATAD3CQ5T2N8 411 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 LIPKQ5VXJ0 399 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 AWAT2Q6E213 333 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 OR52W1Q6IF63 320 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 FAM53AQ6NSI3 398 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 LRRTM1Q86UE6 522 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 UBALD1Q8TB05 177 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 TMEM203Q969S6 136 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 CNBD2Q96M20 576 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 VCX3BQ9H321 246 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 NCOR1P1Q9H4R4 102 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 LINC00574Q9H8X3 128 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 ABCB10Q9NRK6 738 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 DPM3Q9P2X0 92 aa9.37□□□□□ -0.91
RABGGTA-216ENST00000560243 A0A087X0M5 115 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 A0A1B0GX30 115 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 NPIPB11E5RHQ5 1161 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 LY6LH3BQJ8 138 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 F2RL2O00254 374 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 ZNF780AO75290 641 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 SC5DO75845 299 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 IL1AP01583 271 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 HSMCR30P0CW71 290 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 MAPK3P27361 379 aaPredicted RBP9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 KIR2DS4P43632 304 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 KCNJ3P48549 501 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 DYNLT3P51808 116 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 EFNB2P52799 333 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 RBM39Q14498 530 aaKnown RBP9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 MPV17LQ2QL34 196 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 SIGIRRQ6IA17 410 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 Q6ZS46 218 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 CEACAM19Q7Z692 300 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 RTN4RL2Q86UN3 420 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 CDH26Q8IXH8 852 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 MS4A15Q8N5U1 240 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 ZNF565Q8N9K5 539 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 OR4C13Q8NGP0 309 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 CCDC107Q8WV48 283 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 FAM46BQ96A09 425 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 SELENOIQ9C0D9 397 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 ZNF702PQ9H963 129 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 RCC2Q9P258 522 aaKnown RBP9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 FBLN5Q9UBX5 448 aa9.36□□□□□ -0.91
RABGGTA-216ENST00000560243 TMEM30CPA0ZSE6 113 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 FAM90A22PA8MWA6 464 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 BUB1B-PAK6H3BSN5 160 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 TOR1AO14656 332 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 CRTAPO75718 401 aaPredicted RBP9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 MT-ND4P03905 459 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 MGMTP16455 207 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 HSPA13P48723 471 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 RPS25P62851 125 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 TPBGQ13641 420 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 GPR176Q14439 515 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 HLA-DRB5Q30154 266 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 RBM48Q5RL73 367 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 TPTE2P1Q5T6R2 138 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 OR10K2Q6IF99 312 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 RAB12Q6IQ22 244 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 ZNF497Q6ZNH5 498 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 TMEM91Q6ZNR0 172 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 LIAT1Q6ZQX7 453 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 LINC00596Q86U02 117 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 NKAIN3Q8N8D7 197 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 ZNF596Q8TC21 504 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 NEK7Q8TDX7 302 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 UFD1Q92890 307 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 Q96M66 194 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 UQCC2Q9BRT2 126 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 NPFFR1Q9GZQ6 430 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 KCNK15Q9H427 330 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 TCF7L1Q9HCS4 588 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 RAB18Q9NP72 206 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 PCDHB16Q9NRJ7 776 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 IDI2-AS1Q9NZ38 188 aa9.35□□□□□ -0.91
RABGGTA-216ENST00000560243 PSG11Q9UQ72 335 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms